Gene
| Gene Model ID | pfu_aug2.0_620.1_00954 |
|---|---|
| Locus | scaffold620.1 : 37226 ... 51396 : + |
| To GenomeBrowser | scaffold620.1:37226..51396 |
| Genes list of scaffold | scaffold620.1 |
| Synonym | pfu_aug1.0_27360.1_62473 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| alpha- -mannosyl-glycoprotein 4-beta-n-acetylglucosaminyltransferase c-like | GO:0016740 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_620.1_00954.t1 | 1 | 1 | Glyco_transf_54 | 109 | 353 | 0.0 | 281.1 | 0.0 | 0.0 | 280.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_620.1_00954.t1 | gi|260805086|ref|XP_002597418.1| | hypothetical protein BRAFLDRAFT_80585 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_620.1_00954.t1 | gi|573880488|ref|XP_006628448.1| | PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_620.1_00954.t1 | gi|45382741|ref|NP_990012.1| | alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C precursor [Gallus gallus] | 0.0 |
| pfu_aug2.0_620.1_00954.t1 | gi|698419049|ref|XP_009695127.1| | PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like [Cariama cristata] | 0.0 |
| pfu_aug2.0_620.1_00954.t1 | gi|558128401|ref|XP_006115764.1| | PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like [Pelodiscus sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_620.1_00954.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_620.1_00954.t1 atgttcagacgcaagaaacaagccctgttgacgctgattgcgtcgtttgccatggttggcgtcctgcaactggcattcaa tggagagtcttacgtcacacaggacagaatttcaaaaagagaaatatcagcacagacacgcatatcagcagaaataaaga gctttattaagaagcatatcccagacataccgggtgcggtaacaacaaatacaactctgactacagccgacgattacgat gaccaaagtgacgatgataatgacattccgaggaaggaagtccctttgccctatgaagctatccaggatcagtacttcaa aatcaagcatcgacaagccatgttacatggacgcttcagagcctacaagtcattcctgaccattggcattccgacagtga aaaggaaaggtactagctacttggataagacgctgacgtcactcaacaaaagcactcaggctgccgagaagaaagaagtt gtgatagtcgtatttttcacagacaaagaccacgagtggataattcaagaagctcataatatatataataaatatagaaa tgaagtagacaggggattcatccaactggttcatcctcatcacaatgcttatccaaattttactcgtctggaacggactt tcaacgattcagctgagcgtgtcgcctggcgaagtaaacaaaatcttgattattcctatttatttacttattgtcaaaat atatctcattattatatgcaaattgaggacgatgttctggtaacaccgacatacttcaaggatataagacgatacattac caatagaggcagtcattggtttgtgttaagcttctccaagcttggatttattgggaagtgtttcaagtctaaagacctgt caatccttgctgatttcttgctgatgtttttcgcagaaaaacctggtgatattcttctaaatgatcttcgcatgatcaaa ggacagaggaaagaaatcacctatcgtccatctatgttccaacatataggtatcatatcatccttaaaaaataaaaagca acttttattcgagaaaacattccgaggtcagtcatttgaaaggaagaagttttataatgacaatcctgaagcttctcttg acaccaatatggaggcattcgaaggacatacagctgaaaacgcttacaatatttcagagacctatttttgggccgtatca ccgccttccggttcctactaccgagtaatattccactccgctcataatgtcagtagactgtacatttctagtggaataag gacaaagccattagacagaataaaagatgccactataaatgtttcagttaccaaaaagggagagaaatccccgtgtaaaa atctaacaaagataggagaaatgacgtcatctgtttttgataccagtgatacaaacacgactttgccttacaatgttgat tgtatatcaatcgatctttcagaggatcacagaaactgggtcattataagtgaaattgcgatattcttggagaaaacgta g |
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Protein
| Protein ID | pfu_aug2.0_620.1_00954.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_620.1_00954.t1 MFRRKKQALLTLIASFAMVGVLQLAFNGESYVTQDRISKREISAQTRISAEIKSFIKKHIPDIPGAVTTNTTLTTADDYD DQSDDDNDIPRKEVPLPYEAIQDQYFKIKHRQAMLHGRFRAYKSFLTIGIPTVKRKGTSYLDKTLTSLNKSTQAAEKKEV VIVVFFTDKDHEWIIQEAHNIYNKYRNEVDRGFIQLVHPHHNAYPNFTRLERTFNDSAERVAWRSKQNLDYSYLFTYCQN ISHYYMQIEDDVLVTPTYFKDIRRYITNRGSHWFVLSFSKLGFIGKCFKSKDLSILADFLLMFFAEKPGDILLNDLRMIK GQRKEITYRPSMFQHIGIISSLKNKKQLLFEKTFRGQSFERKKFYNDNPEASLDTNMEAFEGHTAENAYNISETYFWAVS PPSGSYYRVIFHSAHNVSRLYISSGIRTKPLDRIKDATINVSVTKKGEKSPCKNLTKIGEMTSSVFDTSDTNTTLPYNVD CISIDLSEDHRNWVIISEIAIFLEKT |
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