Gene
| Gene Model ID | pfu_aug2.0_620.1_00955 |
|---|---|
| Locus | scaffold620.1 : 53366 ... 58398 : + |
| To GenomeBrowser | scaffold620.1:53366..58398 |
| Genes list of scaffold | scaffold620.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_620.1_00955.t1 | 1 | 1 | Glyco_transf_54 | 7 | 244 | 0.0 | 245.6 | 0.0 | 0.0 | 244.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_620.1_00955.t1 | gi|548545686|ref|XP_005754147.1| | PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like isoform X3 [Pundamilia nyererei] | 0.0 |
| pfu_aug2.0_620.1_00955.t1 | gi|554881920|ref|XP_005950701.1| | PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like isoform X3 [Haplochromis burtoni] | 0.0 |
| pfu_aug2.0_620.1_00955.t1 | gi|542254143|ref|XP_005462854.1| | PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like isoform X2 [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_620.1_00955.t1 | gi|499050876|ref|XP_004575953.1| | PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like isoform X2 [Maylandia zebra] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_620.1_00955.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_620.1_00955.t1 atgtggactgagatttggggagcgcacacccaacgatgtttccttacaattggaattccaactgtttatcgaaaagacaa agactacctgatgacgaccatcaagtcactggtcagaaactccaattcttatgaccggaaacgtatcgtgctggtagtac tactggccgacagaaatcatagtcttgtgatggaaagggcggaaactatcaacaggaacttcgttcatttggtgcgcaat ggtcatttgcacatcctccatccttccggcattgaatatcccgacttctcgcttctaaaacgaaatttcaacgatagttt tgaaagagttgcatggcgaagtaaacaaaatattgattattcatatttatttatgtactgtagaaatatttcaagatatt acatacagttggaagacgatgtctcttcggcaaggaatttcccagtggaaatatatcgctttattcagatagtgaacacc agtaagagaacttggcattgccttcagttttcaaacttaggatttattgggaaactttttaaatcttcagatcttgagga gatagcaatgtttatattgatgttctttgacgaacagccgggagatttactcataaagtactatctcagaataaaaacac aatttgaagatattatcaaaaagccgaccttgtttcagcacgagggggttatgtcttccttggatggtaaagtccaaaag gagaaggattggaattatatggaccataaatacgtagctaggaaaagatttttcatcaataatccccaagccaacatcaa aactacaatgagatgctttgaagaccattttccaatcagggcttacgatttgtcggatagatttttctgggccatggcgg caacaaagggggataaatacttgataacatttacatcacttcaaaatttcacacgcatttacgtacagactggacattac atacggaccgccgatgttcttgaaaatgacgatcttgactttaatgaagatgatgaaaccgatgaaaatgttcaggggga aggcaggaaacagctaatcaatccagtcttccatgtgcagaaagcagaggcgaatatgaagaagagattggaaattttac agaaaaatctggcacatttaaaagctgaatacgaaaagcggatgtaccacgggataaagaaacagatgcaatga |
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Protein
| Protein ID | pfu_aug2.0_620.1_00955.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_620.1_00955.t1 MWTEIWGAHTQRCFLTIGIPTVYRKDKDYLMTTIKSLVRNSNSYDRKRIVLVVLLADRNHSLVMERAETINRNFVHLVRN GHLHILHPSGIEYPDFSLLKRNFNDSFERVAWRSKQNIDYSYLFMYCRNISRYYIQLEDDVSSARNFPVEIYRFIQIVNT SKRTWHCLQFSNLGFIGKLFKSSDLEEIAMFILMFFDEQPGDLLIKYYLRIKTQFEDIIKKPTLFQHEGVMSSLDGKVQK EKDWNYMDHKYVARKRFFINNPQANIKTTMRCFEDHFPIRAYDLSDRFFWAMAATKGDKYLITFTSLQNFTRIYVQTGHY IRTADVLENDDLDFNEDDETDENVQGEGRKQLINPVFHVQKAEANMKKRLEILQKNLAHLKAEYEKRMYHGIKKQMQ |
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