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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_620.1_00965
Locus scaffold620.1 : 215668 ... 224508 : +
To GenomeBrowser scaffold620.1:215668..224508
Genes list of scaffold scaffold620.1
Synonym pfu_aug1.0_23124.1_62202

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_620.1_00965.t1 gi|676493430|ref|XP_009066236.1| hypothetical protein LOTGIDRAFT_223001 [Lottia gigantea] 2.0e-22
pfu_aug2.0_620.1_00965.t1 gi|676493427|ref|XP_009066235.1| hypothetical protein LOTGIDRAFT_204866 [Lottia gigantea] 5.0e-20
pfu_aug2.0_620.1_00965.t1 gi|348520096|ref|XP_003447565.1| PREDICTED: cellular retinoic acid-binding protein 1-like [Oreochromis niloticus] 5.0e-13
pfu_aug2.0_620.1_00965.t1 gi|555943726|ref|NP_001273241.1| uncharacterized protein LOC102309430 [Haplochromis burtoni] 1.0e-11
pfu_aug2.0_620.1_00965.t1 gi|742159143|ref|XP_010882609.1| PREDICTED: cellular retinoic acid-binding protein 1 [Esox lucius] 1.0e-11

Transcript
Transcript IDpfu_aug2.0_620.1_00965.t1
Definition-
>pfu_aug2.0_620.1_00965.t1
atgtctgaactagtagggtattggattctggaaaaggacgacgatcaaatggacaactttatgaaagcaatgaatatgga
tgtaattcatagaaaagttggtgcatctgcaaaaactcacgaggacattcgtctagaaggggaaacgtgggaacttaagc
tcagtacttcatatcttacacactctgtcaaattcaagctggacaccgagatcaacgacacgtcgttcgatggaaagaaa
tgcaagtcaaagtttataatggagggaggacatcttgttaattatcagacttacaccgatgccaataaacctaactccaa
agtcacacgtaggcttataaataaggacacaatgacagtgataacaaaataa

Protein
Protein IDpfu_aug2.0_620.1_00965.t1
Definition-
>pfu_aug2.0_620.1_00965.t1
MSELVGYWILEKDDDQMDNFMKAMNMDVIHRKVGASAKTHEDIRLEGETWELKLSTSYLTHSVKFKLDTEINDTSFDGKK
CKSKFIMEGGHLVNYQTYTDANKPNSKVTRRLINKDTMTVITK

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