Gene
| Gene Model ID | pfu_aug2.0_620.1_00968 |
|---|---|
| Locus | scaffold620.1 : 265387 ... 290517 : - |
| To GenomeBrowser | scaffold620.1:265387..290517 |
| Genes list of scaffold | scaffold620.1 |
| Synonym | pfu_aug1.0_789.1_07675 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_620.1_00968.t1 | 1 | 1 | Kazal_1 | 508 | 540 | 3.2e-09 | 36.6 | 1.3e-12 | 9.5e-09 | 35.1 |
| pfu_aug2.0_620.1_00968.t1 | 1 | 1 | Kazal_2 | 514 | 544 | 2.2e-11 | 43.5 | 7.8e-15 | 5.8e-11 | 42.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_620.1_00968.t1 | gi|602711645|ref|XP_007466061.1| | PREDICTED: mucin-5B [Lipotes vexillifer] | 1.0e-16 |
| pfu_aug2.0_620.1_00968.t1 | gi|308489233|ref|XP_003106810.1| | hypothetical protein CRE_16718 [Caenorhabditis remanei] | 5.0e-16 |
| pfu_aug2.0_620.1_00968.t1 | gi|585673745|ref|XP_006818467.1| | PREDICTED: aggrecan core protein-like, partial [Saccoglossus kowalevskii] | 5.0e-13 |
| pfu_aug2.0_620.1_00968.t1 | gi|594635871|ref|XP_007171349.1| | PREDICTED: LOW QUALITY PROTEIN: mucin-5B [Balaenoptera acutorostrata scammoni] | 2.0e-12 |
| pfu_aug2.0_620.1_00968.t1 | gi|308480918|ref|XP_003102665.1| | hypothetical protein CRE_03315 [Caenorhabditis remanei] | 5.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_620.1_00968.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_620.1_00968.t1 atggatgttggcgtgagggggtccaaggagcagaaggaatccgaagttacaggaggaccccctcctgcagaggcctggat gggggacaacctaccctcccatataagaccctttaccgaatctgggattcgatcccgggaccttcgagatgcatatggaa caacacacgtcaccaaaaaggatggaaaagcagcgaacgttgatggaaaactggactttcgcgaaaaattgcattccaat aactatgacaagtcacgacatcctacgaataaaagaacgccacattccatcaacagtggaaggcacccctccaaggtaca tgtagtactcaacacaaaaatagttgatgtacatgccaggcagaaacttagaattgacaataaaggaagtactgtgaaga aaaatagttattcaaaagatgaccacattactcgttccaagcctgcatacctaatttaccccaaacatgatcacatgaac caatcaaaggatgaccattttaattattcaaagaaaagctacttgagccattctaaaaacggtcatgctagtttttccaa acatggccatacaagtcactccaaacatggtcttgcgagtcactccaaacacggtcatgcgagtcatttgaaacacggtc atgtgagccattccaaactcggtgatgcaaatcattccaaacacggtcattggcgtcattccaaacttggtcacgtgggc cattctaaacatggtcacttgagccattcaaatcatggtcacgtgaggaagcaccagatgaagcataaatctcagcccaa agtctctcttccaaataatatcggaaatacacagaagcaaaagaacaatggtaaagtgcaagggcattttaaacttgatg ataaacttaggagtcatcaaatagtttatggtattgatggaaaacagcatttgactgcaagaccacatggtcaaaagcac gatctcactgttcaacgcaaagaagcatccaaagtcaccaaaaagcctaaacatatgaaagctataaaacgtaagaaaaa caagaaaaacataaagaaaggacataagagagtacagcaaaatgttccaaagcacagacaaaatttagttaaaaacagaa acaaacaatttcctacaaaaaggaagcagagtcgcagcaacaagaattataacccagttaaaaacatcgatttcaagcca gaccatttgaaaggaatcaggaaagtgcagcattttaaaggaagcaggaaaatacagcattttaggggaagcgggaatac gcacaatttcaaaggaagcgggaaaatacaaaatttgaaaggaagcgggaaattgcacgatgtgagaggtaaaccgcagg actcttctcaatcctcacataatccagacgacaccctgataaagagataccagttcgctgatagcgataaatcaacatct gtacaattaaatcgtcctggtttgtatcaacatgcccaacaaaacaacaaaggaggaaagagattccgcgtgagaaaatg gtgcatgaaaaagaggaaatgtccttcagcgaaacgtccagtatgtggaagtgacggtcatacgtacttaaacaaatgcc atttaaaacaggaatcctgcagagaaggagatgtgaaagttatgtggaaaacatctgaaatccaagaagatgggaaagaa attattgtggacaagccatacgacggcgtgattgtgttttctggaagtaatataaagtgcaggaactacaataacagagt ttccgaggagattgaaataacttctaacgacgcattgtcacagttagaggatgtcggaaaagaaaaaaaaagaaaacaag gagacgccagcactaatacatcaggggagagaggaacgccgaaaaagacatcaggagatatagggacgccaaaaaagacc gtaggagatgtcgcgcaaataaatacagcagaagatatcaggaggcccacaaagacagtaggagatatcaggacgccaac aaagacagcaagtatcaagacgccaacaaaaacagtacgagatttcaggacgccaaaaaagacaacaggagataccagta cgcacaaaaagacagaagaaaatataaggacgccgaaaaagacaggggattatatcagcacaccaaataagacagtaaga gatatcagtacgtcaaacaggacaacaggaggtaccaggacgcctaaaaagacagcaaaaggtatcagaacgccaacaaa gtcaacaggaggtatgaggacgccaacaaatacaacaggagctaccaggacgcctaaaaagacagcaaaaagtatcagaa cgccaacaaagtcaacaggaggtatcaggacgccaacaaatacaacaggagctaccaggacgcctaaaaagacagcaaaa tgtatcaggacgccaacgaagacagcaggaggtaccgggacgccgacaaagacatcggggggtatcaggacgccaacgaa gacagtaggtggtaacaaaagtccaaaaatgacaacagtagagaatatatcctcgtacaaatcaccgaataaggcatctg agaatttacagtatcagtctcttccatcacttgatatatcaatggttgttggaagcagccttaatatcctcaatgacact gaccatgggcaaggagaaccattctatcaaaatgatggactatggacaaacagaaaaccagcaatcagcatttcaacccc ttatagatcatttcaatcggatgacaccggaatcaaaaagggaggttttgtcattctgccatttgctaacaaatgcttta catcagtcggtttatggaaatcaacaacaaatgccaatcattga |
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Protein
| Protein ID | pfu_aug2.0_620.1_00968.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_620.1_00968.t1 MDVGVRGSKEQKESEVTGGPPPAEAWMGDNLPSHIRPFTESGIRSRDLRDAYGTTHVTKKDGKAANVDGKLDFREKLHSN NYDKSRHPTNKRTPHSINSGRHPSKVHVVLNTKIVDVHARQKLRIDNKGSTVKKNSYSKDDHITRSKPAYLIYPKHDHMN QSKDDHFNYSKKSYLSHSKNGHASFSKHGHTSHSKHGLASHSKHGHASHLKHGHVSHSKLGDANHSKHGHWRHSKLGHVG HSKHGHLSHSNHGHVRKHQMKHKSQPKVSLPNNIGNTQKQKNNGKVQGHFKLDDKLRSHQIVYGIDGKQHLTARPHGQKH DLTVQRKEASKVTKKPKHMKAIKRKKNKKNIKKGHKRVQQNVPKHRQNLVKNRNKQFPTKRKQSRSNKNYNPVKNIDFKP DHLKGIRKVQHFKGSRKIQHFRGSGNTHNFKGSGKIQNLKGSGKLHDVRGKPQDSSQSSHNPDDTLIKRYQFADSDKSTS VQLNRPGLYQHAQQNNKGGKRFRVRKWCMKKRKCPSAKRPVCGSDGHTYLNKCHLKQESCREGDVKVMWKTSEIQEDGKE IIVDKPYDGVIVFSGSNIKCRNYNNRVSEEIEITSNDALSQLEDVGKEKKRKQGDASTNTSGERGTPKKTSGDIGTPKKT VGDVAQINTAEDIRRPTKTVGDIRTPTKTASIKTPTKTVRDFRTPKKTTGDTSTHKKTEENIRTPKKTGDYISTPNKTVR DISTSNRTTGGTRTPKKTAKGIRTPTKSTGGMRTPTNTTGATRTPKKTAKSIRTPTKSTGGIRTPTNTTGATRTPKKTAK CIRTPTKTAGGTGTPTKTSGGIRTPTKTVGGNKSPKMTTVENISSYKSPNKASENLQYQSLPSLDISMVVGSSLNILNDT DHGQGEPFYQNDGLWTNRKPAISISTPYRSFQSDDTGIKKGGFVILPFANKCFTSVGLWKSTTNANH |
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