Gene
| Gene Model ID | pfu_aug2.0_621.1_04405 |
|---|---|
| Locus | scaffold621.1 : 67186 ... 99985 : + |
| To GenomeBrowser | scaffold621.1:67186..99985 |
| Genes list of scaffold | scaffold621.1 |
| Synonym | pfu_aug1.0_1873.1_29895 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| e3 ufm1-protein ligase 1 | GO:0003824 GO:0032268 GO:0043231 GO:0044444 GO:0044763 GO:0048519 GO:0051716 GO:0071569 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_621.1_04405.t1 | 2 | 1 | DUF2042 | 6 | 217 | 0.0 | 267.6 | 0.0 | 0.0 | 266.0 |
| pfu_aug2.0_621.1_04405.t1 | 2 | 2 | DUF2042 | 216 | 235 | 0.0 | 267.6 | 0.06 | 440.0 | -0.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_621.1_04405.t1 | gi|585655453|ref|XP_006815483.1| | PREDICTED: E3 UFM1-protein ligase 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_621.1_04405.t1 | gi|676475199|ref|XP_009060395.1| | hypothetical protein LOTGIDRAFT_229220 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_621.1_04405.t1 | gi|524872872|ref|XP_005093191.1| | PREDICTED: E3 UFM1-protein ligase 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_621.1_04405.t1 | gi|557007101|ref|XP_006004935.1| | PREDICTED: E3 UFM1-protein ligase 1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_621.1_04405.t1 | gi|344264094|ref|XP_003404129.1| | PREDICTED: E3 UFM1-protein ligase 1 [Loxodonta africana] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_621.1_04405.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_621.1_04405.t1 atggcagattgggaggaggtgaaacgtctggcagctgatttccagcgcgcacagctaagcagtacaaagcagaagttgag tgaaagaaatgtagtggagctggttgccaagcttatagagttaaagctgattgatgtgatatatactctggatggaaagg aatatctgacgcctcaggaactaaccaaagagatccgtgatgaactgctggtacatggagggcgcatcaacttggttgat ttacaacaaatccttaatgtggacttcagccatattgaaaccaaagtcagtgagatggtcaagagtgacaaaagcctaat gttagtgctgggacaactagttgacaagagctaccttgatagcctagcagaggaggtgaatgacaagctacaggagaaag gtcatgtgacaataggagaaataacaaagcagtatgacctgcctgctgatttcatctcagagcatatacatgccagagta ggtaggattgtgaggggacaagtggacagctacgataaaaacgtcatatttactgactcatttctcaaacgcatgaaggc acaaataaggggagctttcagcgccatcacaaggcccacaacagttatgaatgtcatgaacagatacagtttccaggaaa ggctgtttttctagtatgatagtatggtgagacttggtatcactgatcctaaggctttcataaagaagagatttaagacg gagcccctgacctacttaggaacatgctgtgctggagttggaatcaaagaccagatagaggccagtgtggaggaagcact ggcagaaaactcatgggctgatatcatgcccctcctaccttcagtgtttagtatggaggatggcagtcagttgctgacag aatgcctcaggaagcatcaatcagctgtccaatgttgtcataccatagttactagtcacaggttccttgagaaatgtcga caaccatttaaggacaaggttgccaaaaaggcagaggaggatgcacgaagtaatccctcgttgttcacagcagacattga gaaaaagggaggtaaatctgtttcgtttgaagatgccggaccctcaaaagaagataaaagggatcaacgacgtaaaaaac aagctggtgccacaaaaagtggaggtggtacccaaggtcgagaggtgaaaaccaaggcaacaaagaaaaaatataacaaa ggtcgtggtgaccatggcaacgagtcagatgaagaggaccatgggaagaagttggaggaagcggtagagtttatgccgat agatggaatagaggcggagctgagaaaacaaacagacttactggattgtcctgaagaatttataacggagatagccacac agctttacaggcctttatgccgggaatatcaggagatgggaaagtctatatttctgactaatgttggtgtagataccggt acagggagaaagaaaactcacggagaactacaggaaaaaatagcaggattgtggaccaactgtaaactctttgaaaaagg attaaagttgttttctgaggacacagaggcccagcttgtcaagcatttgttaaagtcagtgtgcagtgatattgttaatg ttgtggtgtgtgctatcggctcagagaacatgatatcagtaccggaggacagcaatctaactacagagaatagagccaaa attatagccaaactacctgaaaatgtacagtctgtgttaacaaagcttcacacatctctaaatggaaaggttcttctcat tctttctatggttgacaatgtatttacggattactggcttctctaa |
|
Protein
| Protein ID | pfu_aug2.0_621.1_04405.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_621.1_04405.t1 MADWEEVKRLAADFQRAQLSSTKQKLSERNVVELVAKLIELKLIDVIYTLDGKEYLTPQELTKEIRDELLVHGGRINLVD LQQILNVDFSHIETKVSEMVKSDKSLMLVLGQLVDKSYLDSLAEEVNDKLQEKGHVTIGEITKQYDLPADFISEHIHARV GRIVRGQVDSYDKNVIFTDSFLKRMKAQIRGAFSAITRPTTVMNVMNRYSFQERLFFXYDSMVRLGITDPKAFIKKRFKT EPLTYLGTCCAGVGIKDQIEASVEEALAENSWADIMPLLPSVFSMEDGSQLLTECLRKHQSAVQCCHTIVTSHRFLEKCR QPFKDKVAKKAEEDARSNPSLFTADIEKKGGKSVSFEDAGPSKEDKRDQRRKKQAGATKSGGGTQGREVKTKATKKKYNK GRGDHGNESDEEDHGKKLEEAVEFMPIDGIEAELRKQTDLLDCPEEFITEIATQLYRPLCREYQEMGKSIFLTNVGVDTG TGRKKTHGELQEKIAGLWTNCKLFEKGLKLFSEDTEAQLVKHLLKSVCSDIVNVVVCAIGSENMISVPEDSNLTTENRAK IIAKLPENVQSVLTKLHTSLNGKVLLILSMVDNVFTDYWLL |
|