Gene
| Gene Model ID | pfu_aug2.0_623.1_11006 |
|---|---|
| Locus | scaffold623.1 : 139046 ... 143967 : + |
| To GenomeBrowser | scaffold623.1:139046..143967 |
| Genes list of scaffold | scaffold623.1 |
| Synonym | pfu_aug1.0_155.1_57997 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_623.1_11006.t1 | 1 | 1 | Arrestin_C | 21 | 154 | 2.3e-16 | 60.1 | 3.8e-20 | 2.8e-16 | 59.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_623.1_11006.t1 | gi|676493388|ref|XP_009066223.1| | hypothetical protein LOTGIDRAFT_169670 [Lottia gigantea] | 6.0e-11 |
| pfu_aug2.0_623.1_11006.t1 | gi|383852390|ref|XP_003701711.1| | PREDICTED: arrestin domain-containing protein 2 [Megachile rotundata] | 2.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_623.1_11006.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_623.1_11006.t1 atgacagatcccatagaagtacacagagaaaagattataaagggatgctgtactgacggaggggctgtggatgtccatat tacatcaaagaaaaccggctatataccaggagaaactatgaaatacgaaataaaactagataatcatagctcacgtacaa ttaacaaagtgcactgctcactctgcaagcgaatgattttcaaaggaaaaagtaaaagtggcaaacaaacggagaaaaag ttcagtgataaacatttatatgacatgtttgatacgacagtggaatgtaaatccggggaatcagaagacttagggcgcag gtcttacgtcataccggaactgccaccatcttactatgagggatgtgattttatagactgtctctattacattcaggtaa aactgtcgttcaagaagagtttggcgacaataaaagcccagcatgaggtgatcataggtactacagcgactccagagcat ctacaagtcgacaacaatggagaacgcaagaggaggatgtcattccagacacttgttaggactattatatgggagtga |
|
Protein
| Protein ID | pfu_aug2.0_623.1_11006.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_623.1_11006.t1 MTDPIEVHREKIIKGCCTDGGAVDVHITSKKTGYIPGETMKYEIKLDNHSSRTINKVHCSLCKRMIFKGKSKSGKQTEKK FSDKHLYDMFDTTVECKSGESEDLGRRSYVIPELPPSYYEGCDFIDCLYYIQVKLSFKKSLATIKAQHEVIIGTTATPEH LQVDNNGERKRRMSFQTLVRTIIWE |
|