Gene
| Gene Model ID | pfu_aug2.0_63.1_10199 |
|---|---|
| Locus | scaffold63.1 : 222 ... 7615 : - |
| To GenomeBrowser | scaffold63.1:222..7615 |
| Genes list of scaffold | scaffold63.1 |
| Synonym | pfu_aug1.0_1841.1_51428 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dna repair protein rev1 isoform x2 | GO:0044260 GO:0090304 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_63.1_10199.t1 | 1 | 1 | BRCT | 51 | 125 | 5.0e-08 | 32.9 | 2.4e-11 | 1.2e-07 | 31.7 |
| pfu_aug2.0_63.1_10199.t1 | 2 | 1 | PTCB-BRCT | 58 | 120 | 3.8e-08 | 33.0 | 1.8e-11 | 8.9e-08 | 31.8 |
| pfu_aug2.0_63.1_10199.t1 | 2 | 1 | IMS | 244 | 264 | 1.8e-36 | 125.2 | 2.1 | 10000.0 | -3.9 |
| pfu_aug2.0_63.1_10199.t1 | 2 | 2 | PTCB-BRCT | 330 | 360 | 3.8e-08 | 33.0 | 1.5 | 7600.0 | -3.2 |
| pfu_aug2.0_63.1_10199.t1 | 2 | 2 | IMS | 377 | 583 | 1.8e-36 | 125.2 | 8.99999e-40 | 4.4e-36 | 123.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_63.1_10199.t1 | gi|676426717|ref|XP_009044713.1| | hypothetical protein LOTGIDRAFT_170636 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_63.1_10199.t1 | gi|585680586|ref|XP_006819721.1| | PREDICTED: DNA repair protein REV1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_63.1_10199.t1 | gi|507572490|ref|XP_004669837.1| | PREDICTED: DNA repair protein REV1 isoform X2 [Jaculus jaculus] | 0.0 |
| pfu_aug2.0_63.1_10199.t1 | gi|507572488|ref|XP_004669836.1| | PREDICTED: DNA repair protein REV1 isoform X1 [Jaculus jaculus] | 0.0 |
| pfu_aug2.0_63.1_10199.t1 | gi|488532757|ref|XP_004458114.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_63.1_10199.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_63.1_10199.t1 atgaataatacaggacctcctgttaggggaagaggtggtcgcaagcatgcattggcaaataggaaggagtcatttggaga ctatatggcagcaaagaaagccaaactaaacgatcagttcttagagaaacaaaccatcattggaggtcagacttctgata tcttcaaaggtgttgtcatccacattaatggttacacaaagccttcatctgatgaactgaagaagatgatgatgttacat ggaggtcactgtgagcattacctgtcaaaacgacgtgttacacatgtagtggccactaacttacctaacagtaaaataat gaggcaccttaagcactgtaaagtagtacgaccagactggattactgatagtgtgaaagctgggaagaaacttccatatg taccgtatcttctttttaccaaagagacaagaaatcaacaatatctggatgccaacagtgctacatcaagcattcagcta agtaaaaatgttcacgatacattcgtcccgagtacaagtaacaaagaggattgtgggaatttggacacaatcagtgaact ttcctctgatgatgattcaagttcgtcagatgctatgatgtactctcacagaacagccttgttggaaaaatgtgaaagtt taccggaggctaatgaaatttcgcttcaaaaggatgaaacgaggcatttcaaaaatttattttccatgaatcaaagtata caatcttcatcaaaccagatttcacatcctgattcttcatatatggataaaaccacatgtatttcaagattagatcattc tccacgtaaatttcaaaacaatagtaacataaggggagacgactcttctttgaatgccacattaacaaataggaccaaca aatcctatgctgctggtaaagccggtgatccagattatttaagtgaattctacaatcattctcggcttcatcatctatct acatggaaaactcagtggagagattatgtgagtaaactacaaagccaagatgctgacttcaggggacgggaaaaactagc aaaacttgtttatgataaaaatgttggtggacaaatcagtgcagagaggttaagcatgtcacaggacataaaacgcacaa ttatgcatattgacatggattgtttctttgtatcagtgggattaagaaaaaggccagatctgaaagggaagcctatagct gtgacacactctaaaggtaacggtaaagctcctacggtaccaggtagtgatgtagagctggaaaggatgttatggagggg aggtaaatcaagtcctagaaaatctcctcatggtcaggtcggtggagcagcttccagagacactacagaggaaggcaggg catcgtgtaacggagtgaagtccctacataccagcccagtaaaagcaccagaaacttataattctatggcagaaatagca tcttgtagctatgaagcaagacaggcaggtgttaaaaatgggatgtttctgggaccagcgaagaagttatgcccagattt aatcacaataccgtacgactttgagggatatcaagaagtatctaaatgtctctatgatacagtagccagttatacacatg agatagaggcagttagctgtgatgaaatgctagtggactgtacagatttattaacaagcactggagctgaaccattggaa tttgcctccatgctgcgtgaagaaatatttgaaaaaactagatgcactgcctctattgggatggcatacctgtcaactct ccctcttttggagggagactccctctttttgtcccccgctttcgcgaaagcatggggacattaa |
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Protein
| Protein ID | pfu_aug2.0_63.1_10199.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_63.1_10199.t1 MNNTGPPVRGRGGRKHALANRKESFGDYMAAKKAKLNDQFLEKQTIIGGQTSDIFKGVVIHINGYTKPSSDELKKMMMLH GGHCEHYLSKRRVTHVVATNLPNSKIMRHLKHCKVVRPDWITDSVKAGKKLPYVPYLLFTKETRNQQYLDANSATSSIQL SKNVHDTFVPSTSNKEDCGNLDTISELSSDDDSSSSDAMMYSHRTALLEKCESLPEANEISLQKDETRHFKNLFSMNQSI QSSSNQISHPDSSYMDKTTCISRLDHSPRKFQNNSNIRGDDSSLNATLTNRTNKSYAAGKAGDPDYLSEFYNHSRLHHLS TWKTQWRDYVSKLQSQDADFRGREKLAKLVYDKNVGGQISAERLSMSQDIKRTIMHIDMDCFFVSVGLRKRPDLKGKPIA VTHSKGNGKAPTVPGSDVELERMLWRGGKSSPRKSPHGQVGGAASRDTTEEGRASCNGVKSLHTSPVKAPETYNSMAEIA SCSYEARQAGVKNGMFLGPAKKLCPDLITIPYDFEGYQEVSKCLYDTVASYTHEIEAVSCDEMLVDCTDLLTSTGAEPLE FASMLREEIFEKTRCTASIGMAYLSTLPLLEGDSLFLSPAFAKAWGH |
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