Gene
| Gene Model ID | pfu_aug2.0_63.1_10201 |
|---|---|
| Locus | scaffold63.1 : 85787 ... 115545 : - |
| To GenomeBrowser | scaffold63.1:85787..115545 |
| Genes list of scaffold | scaffold63.1 |
| Synonym | pfu_aug1.0_892.1_51112 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_63.1_10201.t1 | 3 | 1 | SK_channel | 250 | 369 | 0.0 | 156.5 | 0.0 | 0.0 | 156.5 |
| pfu_aug2.0_63.1_10201.t1 | 3 | 2 | SK_channel | 445 | 458 | 0.0 | 156.5 | 0.74 | 5500.0 | -2.9 |
| pfu_aug2.0_63.1_10201.t1 | 1 | 1 | CaMBD | 505 | 578 | 2.1e-30 | 104.3 | 7.2e-34 | 5.4e-30 | 103.0 |
| pfu_aug2.0_63.1_10201.t1 | 3 | 3 | SK_channel | 562 | 584 | 0.0 | 156.5 | 0.14 | 1000.0 | -0.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_63.1_10201.t1 | gi|751773392|ref|XP_011213292.1| | PREDICTED: small conductance calcium-activated potassium channel protein-like, partial [Bactrocera dorsalis] | 0.0 |
| pfu_aug2.0_63.1_10201.t1 | gi|195046532|ref|XP_001992174.1| | GH24618 [Drosophila grimshawi] | 0.0 |
| pfu_aug2.0_63.1_10201.t1 | gi|755939902|ref|XP_011297934.1| | PREDICTED: small conductance calcium-activated potassium channel protein [Fopius arisanus] | 0.0 |
| pfu_aug2.0_63.1_10201.t1 | gi|281359900|ref|NP_996354.2| | small conductance calcium-activated potassium channel, isoform M [Drosophila melanogaster] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_63.1_10201.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_63.1_10201.t1 atgtctgaagtagtaatggtagagccagccaatgaaacaacccgcatcgattctactgaacagctgctgcgcgacttgcc tgtagcattcagtgatctcgataaaagagggaaggatgtcgtcagcgaaaaggctaccgccaatcgccatgaacaaaaca ataccacgcagatggaaacaaattctttgcaaaatataggacaaactagtcacaatcatggaaaacttgacggaaagatt aacagggcttatacttcccctgaaattgagctaaatcactcgtcggctgtgtacggctcaggcgcggaacatgagatagg tagtttggaaagccaagctgacactcataaggagggagaccaagtcccgcagatgagtaacgacagtggcggatccagta ctctgccgcataatcggcttcatctgagagcgtcgtcagatgatgatggtgcaaggggctctcttcttgaaaacacaaag ggacgagaggatggtagtaaacatattgattcaaggccacaccctatgtcagatataggagtagattatatgagagttaa tggagcgatcggatcattcaaacagcttcagaaacctacttccatgcaatccctccctacctccagtaaaatgagctaca cctcagacgatgccaacattgggttagtggagaaaggagaagcgggggaaaaatatggcatggacgacaatgctaagaaa aaagaccaaaaacccaatgttggttacagactcggaaaacgtaaaacattgtacgaacggagaaaaaagatttcagatta ttgtctggtgtttggaatgctgggaattatacttatgattctggaaacagagttaacgatggcggacgtatacactaagg atgacgtgtactctatagtgttaaagtcgttgatatcattgtccaccctggtgcttctagcactaataatggcctatcac attgtagagattcagctatttgccatcgataattgtgtggaggactggcgtatcgccatctcctggcggcgatgtttaca gctgggtctggaacttatcgtgtgtgccatccacccgatacccggagcattttatttttcgtggacgacgacaaacgcta tttcatgtgatgtttctttaggttgtgaattattaactcagaaagtaccagttgatattctgttatctatccccatgttt ctccgactttacctcatagcccgtgtcatgttattacatagcagactctttacggatgcctcttcacggagtatcggagc tctcaatagaatcaactttgacactcattttgtacttaaaacactaatgcatatctgcccggggacagtcatgatggtgt ttatgttttccatgtggattataaccagttggctcttacgagcctgtgaatctttgcttaaaggtgcaggggtgacagct ttaattgttgcagttttagcgaagaagctagatcttaatagggccgaaaaacatgtccataatttcatgatggacactca actacagaaaaggcttaaaaatgcagcagctaatgttttacgggaaacatggttaatttataagtacacaaagttaatga aaaggatagatgtagctaaagttagggtacatcagaggaaattcctgcaagcgattcacagcttgcggagtgttaaaatg ggacaacgaaagttagcagagaatcaaaatacaatagtagatatggccaagactgtaggaatgacaggtttggaggccac ttccggtgtttatatatctgttccttacgttcagtatcaacagacgcaaatgagcattcgtgatatggtatccgagatga aggataatactgcagctgttgagaaaagagtagatgaaatagaaaagaaattggcgatgcttcaaggacagctggatatg cttcccgcgcttatagcagatcgcgtcatcagcagacgtcgtgacgatacaagtgtagtctcgcgagagtccagggaaat aaaggacgtagagggaagaaaacccgattttaatcagcttagacgtagttccccaccaaggagaagaaaatatgcctttc aacctatatctagccctaccaatccacagaatgcttcagagcctgatgtgcccgtcgctaatgacgattcttcctctgta cagggagatattagtcagatatga |
|
Protein
| Protein ID | pfu_aug2.0_63.1_10201.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_63.1_10201.t1 MSEVVMVEPANETTRIDSTEQLLRDLPVAFSDLDKRGKDVVSEKATANRHEQNNTTQMETNSLQNIGQTSHNHGKLDGKI NRAYTSPEIELNHSSAVYGSGAEHEIGSLESQADTHKEGDQVPQMSNDSGGSSTLPHNRLHLRASSDDDGARGSLLENTK GREDGSKHIDSRPHPMSDIGVDYMRVNGAIGSFKQLQKPTSMQSLPTSSKMSYTSDDANIGLVEKGEAGEKYGMDDNAKK KDQKPNVGYRLGKRKTLYERRKKISDYCLVFGMLGIILMILETELTMADVYTKDDVYSIVLKSLISLSTLVLLALIMAYH IVEIQLFAIDNCVEDWRIAISWRRCLQLGLELIVCAIHPIPGAFYFSWTTTNAISCDVSLGCELLTQKVPVDILLSIPMF LRLYLIARVMLLHSRLFTDASSRSIGALNRINFDTHFVLKTLMHICPGTVMMVFMFSMWIITSWLLRACESLLKGAGVTA LIVAVLAKKLDLNRAEKHVHNFMMDTQLQKRLKNAAANVLRETWLIYKYTKLMKRIDVAKVRVHQRKFLQAIHSLRSVKM GQRKLAENQNTIVDMAKTVGMTGLEATSGVYISVPYVQYQQTQMSIRDMVSEMKDNTAAVEKRVDEIEKKLAMLQGQLDM LPALIADRVISRRRDDTSVVSRESREIKDVEGRKPDFNQLRRSSPPRRRKYAFQPISSPTNPQNASEPDVPVANDDSSSV QGDISQI |
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