Gene
Gene Model ID | pfu_aug2.0_63.1_10205 |
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Locus | scaffold63.1 : 203125 ... 217172 : + |
To GenomeBrowser | scaffold63.1:203125..217172 |
Genes list of scaffold | scaffold63.1 |
Synonym | pfu_aug1.0_892.1_51116 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
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beta-hexosaminidase beta chain precursor | GO:0016798 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_63.1_10205.t2 | 1 | 1 | Glycohydro_20b2 | 38 | 158 | 1.4e-27 | 96.9 | 8.2e-31 | 3.0e-27 | 95.7 |
pfu_aug2.0_63.1_10205.t2 | 2 | 1 | Glyco_hydro_20 | 180 | 434 | 0.0 | 244.6 | 0.0 | 0.0 | 237.7 |
pfu_aug2.0_63.1_10205.t2 | 2 | 2 | Glyco_hydro_20 | 465 | 509 | 0.0 | 244.6 | 0.0014 | 5.1 | 6.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_63.1_10205.t2 | gi|498981231|ref|XP_004550010.1| | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_63.1_10205.t1 |
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Definition | - |
>pfu_aug2.0_63.1_10205.t1 atggcggtgactgtggcagtgattttcctgctctgcttcttttctacggggagaggaaacaatcaagctcaccacgagga aagttactcaacgactcccacaaggggtcagccatggcccatgccgcaaaaatatagcgtgacaacaaagacatacgata ttgatagtaataacttccagttcactgcatcaggacaaacttgtgacattctaactaaagcctttgcacgttacaagacc atcatatttagcccacaagataccaagctccggttctacccaaatagattcaaccgtgtcgaggagggtgtgactggact caatgttaaagtgcaaaaagcttgtgaagaatatccctttttgggaatggatgaatcatatgaattgatggtaccagaca gtagtggtcaggccactctatcatcagtcagtgtgtggggtgccctgagaggactggaaacatttagtcagctgatcacc ggtacaccaggaaatgggtacaaaataaacggtacaacaataagtgacagtccccgtttccagcacagaggactcctgtt tgatactagcaggcatttcttgggaactgatgttcttaaaaagaacttggatgccatggcgcagagcaagtttaacgtct tccactggcacatcgtggatgatcagtcctttccgtatgttagccaagcctttccacagatgagccaaatgggtgcctat gatcagatgcatttgtacagtcccaatgatgtgaaggaaataatagattacgctagagatcgtgggatcagagtcattcc agagtttgacactccagggcactcccagtcatggggtaaaggaatcactgacttgttaaccaagtgctattccaagggaa ctccgacaggaacctttggacctatagatcctactgtaaattctaccttccagttcctgaataaattctttacggaaatt aaaaatgtatttcccgacaagtacgttcatctaggaggtgatgaagtctcattctcatgttggcagtctaacccaaacat aacagagttcatgaaacagcagaaattcggaactaactatgctaaattggaagaatactatatgcagaaactcatagata taatgaatggtttggataaaggttacttaatatggcaggaagtaatagataatggagcaaaggtgaaagccgacactgta gtggaggtatggaaggggggatggcaggcagagatgggtaaagtaacgggacttggctatcagagtgtgctgtcctcctg ctggtaccttaattatatatcatatggatcagactggaataaatactatctctgtgaaccttacaatttcaaaggcgtgg cttccaggcagagtctattaacggcccaggttactgtacctcggaatattgatgcctatcaccatgcaccaaataattga |
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Transcript ID | pfu_aug2.0_63.1_10205.t2 |
Definition | - |
>pfu_aug2.0_63.1_10205.t2 atggcggtgactgtggcagtgattttcctgctctgcttcttttctacggggagaggaaacaatcaagctcaccacgagga aagttactcaacgactcccacaaggggtcagccatggcccatgccgcaaaaatatagcgtgacaacaaagacatacgata ttgatagtaataacttccagttcactgcatcaggacaaacttgtgacattctaactaaagcctttgcacgttacaagacc atcatatttagcccacaagataccaagctccggttctacccaaatagattcaaccgtgtcgaggagggtgtgactggact caatgttaaagtgcaaaaagcttgtgaagaatatccctttttgggaatggatgaatcatatgaattgatggtaccagaca gtagtggtcaggccactctatcatcagtcagtgtgtggggtgccctgagaggactggaaacatttagtcagctgatcacc ggtacaccaggaaatgggtacaaaataaacggtacaacaataagtgacagtccccgtttccagcacagaggactcctgtt tgatactagcaggcatttcttgggaactgatgttcttaaaaagaacttggatgccatggcgcagagcaagtttaacgtct tccactggcacatcgtggatgatcagtcctttccgtatgttagccaagcctttccacagatgagccaaatgggtgcctat gatcagatgcatttgtacagtcccaatgatgtgaaggaaataatagattacgctagagatcgtgggatcagagtcattcc agagtttgacactccagggcactcccagtcatggggtaaaggaatcactgacttgttaaccaagtgctattccaagggaa ctccgacaggaacctttggacctatagatcctactgtaaattctaccttccagttcctgaataaattctttacggaaatt aaaaatgtatttcccgacaagtacgttcatctaggaggtgatgaagtctcattctcatgttggcagtctaacccaaacat aacagagttcatgaaacagcagaaattcggaactaactatgctaaattggaagaatactatatgcagaaactcatagata taatgaatggtttggataaaggttacttaatatggcaggaagtaatagataatggagcaaagatagataagtcagccatc ggggaggtgtataggagtgaagcctatatgttagatatattcctaatgacactgaagggttatagggctatactacaagc atgctggtacctcgacatcatatcatacggagttaactggcaaaaattctatgattgtgacccccataacttccctggta aatgtagtgacactgcagctttgtttgttattgcttttgtgaaagccgacactgtagtggaggtatggaaggggggatgg caggcagagatgggtaaagtaacgggacttggctatcagagtgtgctgtcctcctgctggtaccttaattatatatcata tggatcagactggaataaatactatctctgtgaaccttacaatttcaaaggcgtggcttccaggcagagtctattaacgg cccaggttactgtacctcggaatattgatgcctatcaccatgcaccaaataattga |
Protein
Protein ID | pfu_aug2.0_63.1_10205.t1 |
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Definition | - |
>pfu_aug2.0_63.1_10205.t1 MAVTVAVIFLLCFFSTGRGNNQAHHEESYSTTPTRGQPWPMPQKYSVTTKTYDIDSNNFQFTASGQTCDILTKAFARYKT IIFSPQDTKLRFYPNRFNRVEEGVTGLNVKVQKACEEYPFLGMDESYELMVPDSSGQATLSSVSVWGALRGLETFSQLIT GTPGNGYKINGTTISDSPRFQHRGLLFDTSRHFLGTDVLKKNLDAMAQSKFNVFHWHIVDDQSFPYVSQAFPQMSQMGAY DQMHLYSPNDVKEIIDYARDRGIRVIPEFDTPGHSQSWGKGITDLLTKCYSKGTPTGTFGPIDPTVNSTFQFLNKFFTEI KNVFPDKYVHLGGDEVSFSCWQSNPNITEFMKQQKFGTNYAKLEEYYMQKLIDIMNGLDKGYLIWQEVIDNGAKVKADTV VEVWKGGWQAEMGKVTGLGYQSVLSSCWYLNYISYGSDWNKYYLCEPYNFKGVASRQSLLTAQVTVPRNIDAYHHAPNN |
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Protein ID | pfu_aug2.0_63.1_10205.t2 |
Definition | - |
>pfu_aug2.0_63.1_10205.t2 MAVTVAVIFLLCFFSTGRGNNQAHHEESYSTTPTRGQPWPMPQKYSVTTKTYDIDSNNFQFTASGQTCDILTKAFARYKT IIFSPQDTKLRFYPNRFNRVEEGVTGLNVKVQKACEEYPFLGMDESYELMVPDSSGQATLSSVSVWGALRGLETFSQLIT GTPGNGYKINGTTISDSPRFQHRGLLFDTSRHFLGTDVLKKNLDAMAQSKFNVFHWHIVDDQSFPYVSQAFPQMSQMGAY DQMHLYSPNDVKEIIDYARDRGIRVIPEFDTPGHSQSWGKGITDLLTKCYSKGTPTGTFGPIDPTVNSTFQFLNKFFTEI KNVFPDKYVHLGGDEVSFSCWQSNPNITEFMKQQKFGTNYAKLEEYYMQKLIDIMNGLDKGYLIWQEVIDNGAKIDKSAI GEVYRSEAYMLDIFLMTLKGYRAILQACWYLDIISYGVNWQKFYDCDPHNFPGKCSDTAALFVIAFVKADTVVEVWKGGW QAEMGKVTGLGYQSVLSSCWYLNYISYGSDWNKYYLCEPYNFKGVASRQSLLTAQVTVPRNIDAYHHAPNN |