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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_63.1_10205
Locus scaffold63.1 : 203125 ... 217172 : +
To GenomeBrowser scaffold63.1:203125..217172
Genes list of scaffold scaffold63.1
Synonym pfu_aug1.0_892.1_51116

Manual annotation
Annotation by Blast2GO
Annotation GO
beta-hexosaminidase beta chain precursor GO:0016798

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_63.1_10205.t2 1 1 Glycohydro_20b2 38 158 1.4e-27 96.9 8.2e-31 3.0e-27 95.7
pfu_aug2.0_63.1_10205.t2 2 1 Glyco_hydro_20 180 434 0.0 244.6 0.0 0.0 237.7
pfu_aug2.0_63.1_10205.t2 2 2 Glyco_hydro_20 465 509 0.0 244.6 0.0014 5.1 6.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_63.1_10205.t2 gi|498981231|ref|XP_004550010.1| 0.0

Transcript
Transcript IDpfu_aug2.0_63.1_10205.t1
Definition-
>pfu_aug2.0_63.1_10205.t1
atggcggtgactgtggcagtgattttcctgctctgcttcttttctacggggagaggaaacaatcaagctcaccacgagga
aagttactcaacgactcccacaaggggtcagccatggcccatgccgcaaaaatatagcgtgacaacaaagacatacgata
ttgatagtaataacttccagttcactgcatcaggacaaacttgtgacattctaactaaagcctttgcacgttacaagacc
atcatatttagcccacaagataccaagctccggttctacccaaatagattcaaccgtgtcgaggagggtgtgactggact
caatgttaaagtgcaaaaagcttgtgaagaatatccctttttgggaatggatgaatcatatgaattgatggtaccagaca
gtagtggtcaggccactctatcatcagtcagtgtgtggggtgccctgagaggactggaaacatttagtcagctgatcacc
ggtacaccaggaaatgggtacaaaataaacggtacaacaataagtgacagtccccgtttccagcacagaggactcctgtt
tgatactagcaggcatttcttgggaactgatgttcttaaaaagaacttggatgccatggcgcagagcaagtttaacgtct
tccactggcacatcgtggatgatcagtcctttccgtatgttagccaagcctttccacagatgagccaaatgggtgcctat
gatcagatgcatttgtacagtcccaatgatgtgaaggaaataatagattacgctagagatcgtgggatcagagtcattcc
agagtttgacactccagggcactcccagtcatggggtaaaggaatcactgacttgttaaccaagtgctattccaagggaa
ctccgacaggaacctttggacctatagatcctactgtaaattctaccttccagttcctgaataaattctttacggaaatt
aaaaatgtatttcccgacaagtacgttcatctaggaggtgatgaagtctcattctcatgttggcagtctaacccaaacat
aacagagttcatgaaacagcagaaattcggaactaactatgctaaattggaagaatactatatgcagaaactcatagata
taatgaatggtttggataaaggttacttaatatggcaggaagtaatagataatggagcaaaggtgaaagccgacactgta
gtggaggtatggaaggggggatggcaggcagagatgggtaaagtaacgggacttggctatcagagtgtgctgtcctcctg
ctggtaccttaattatatatcatatggatcagactggaataaatactatctctgtgaaccttacaatttcaaaggcgtgg
cttccaggcagagtctattaacggcccaggttactgtacctcggaatattgatgcctatcaccatgcaccaaataattga
Transcript IDpfu_aug2.0_63.1_10205.t2
Definition-
>pfu_aug2.0_63.1_10205.t2
atggcggtgactgtggcagtgattttcctgctctgcttcttttctacggggagaggaaacaatcaagctcaccacgagga
aagttactcaacgactcccacaaggggtcagccatggcccatgccgcaaaaatatagcgtgacaacaaagacatacgata
ttgatagtaataacttccagttcactgcatcaggacaaacttgtgacattctaactaaagcctttgcacgttacaagacc
atcatatttagcccacaagataccaagctccggttctacccaaatagattcaaccgtgtcgaggagggtgtgactggact
caatgttaaagtgcaaaaagcttgtgaagaatatccctttttgggaatggatgaatcatatgaattgatggtaccagaca
gtagtggtcaggccactctatcatcagtcagtgtgtggggtgccctgagaggactggaaacatttagtcagctgatcacc
ggtacaccaggaaatgggtacaaaataaacggtacaacaataagtgacagtccccgtttccagcacagaggactcctgtt
tgatactagcaggcatttcttgggaactgatgttcttaaaaagaacttggatgccatggcgcagagcaagtttaacgtct
tccactggcacatcgtggatgatcagtcctttccgtatgttagccaagcctttccacagatgagccaaatgggtgcctat
gatcagatgcatttgtacagtcccaatgatgtgaaggaaataatagattacgctagagatcgtgggatcagagtcattcc
agagtttgacactccagggcactcccagtcatggggtaaaggaatcactgacttgttaaccaagtgctattccaagggaa
ctccgacaggaacctttggacctatagatcctactgtaaattctaccttccagttcctgaataaattctttacggaaatt
aaaaatgtatttcccgacaagtacgttcatctaggaggtgatgaagtctcattctcatgttggcagtctaacccaaacat
aacagagttcatgaaacagcagaaattcggaactaactatgctaaattggaagaatactatatgcagaaactcatagata
taatgaatggtttggataaaggttacttaatatggcaggaagtaatagataatggagcaaagatagataagtcagccatc
ggggaggtgtataggagtgaagcctatatgttagatatattcctaatgacactgaagggttatagggctatactacaagc
atgctggtacctcgacatcatatcatacggagttaactggcaaaaattctatgattgtgacccccataacttccctggta
aatgtagtgacactgcagctttgtttgttattgcttttgtgaaagccgacactgtagtggaggtatggaaggggggatgg
caggcagagatgggtaaagtaacgggacttggctatcagagtgtgctgtcctcctgctggtaccttaattatatatcata
tggatcagactggaataaatactatctctgtgaaccttacaatttcaaaggcgtggcttccaggcagagtctattaacgg
cccaggttactgtacctcggaatattgatgcctatcaccatgcaccaaataattga

Protein
Protein IDpfu_aug2.0_63.1_10205.t1
Definition-
>pfu_aug2.0_63.1_10205.t1
MAVTVAVIFLLCFFSTGRGNNQAHHEESYSTTPTRGQPWPMPQKYSVTTKTYDIDSNNFQFTASGQTCDILTKAFARYKT
IIFSPQDTKLRFYPNRFNRVEEGVTGLNVKVQKACEEYPFLGMDESYELMVPDSSGQATLSSVSVWGALRGLETFSQLIT
GTPGNGYKINGTTISDSPRFQHRGLLFDTSRHFLGTDVLKKNLDAMAQSKFNVFHWHIVDDQSFPYVSQAFPQMSQMGAY
DQMHLYSPNDVKEIIDYARDRGIRVIPEFDTPGHSQSWGKGITDLLTKCYSKGTPTGTFGPIDPTVNSTFQFLNKFFTEI
KNVFPDKYVHLGGDEVSFSCWQSNPNITEFMKQQKFGTNYAKLEEYYMQKLIDIMNGLDKGYLIWQEVIDNGAKVKADTV
VEVWKGGWQAEMGKVTGLGYQSVLSSCWYLNYISYGSDWNKYYLCEPYNFKGVASRQSLLTAQVTVPRNIDAYHHAPNN
Protein IDpfu_aug2.0_63.1_10205.t2
Definition-
>pfu_aug2.0_63.1_10205.t2
MAVTVAVIFLLCFFSTGRGNNQAHHEESYSTTPTRGQPWPMPQKYSVTTKTYDIDSNNFQFTASGQTCDILTKAFARYKT
IIFSPQDTKLRFYPNRFNRVEEGVTGLNVKVQKACEEYPFLGMDESYELMVPDSSGQATLSSVSVWGALRGLETFSQLIT
GTPGNGYKINGTTISDSPRFQHRGLLFDTSRHFLGTDVLKKNLDAMAQSKFNVFHWHIVDDQSFPYVSQAFPQMSQMGAY
DQMHLYSPNDVKEIIDYARDRGIRVIPEFDTPGHSQSWGKGITDLLTKCYSKGTPTGTFGPIDPTVNSTFQFLNKFFTEI
KNVFPDKYVHLGGDEVSFSCWQSNPNITEFMKQQKFGTNYAKLEEYYMQKLIDIMNGLDKGYLIWQEVIDNGAKIDKSAI
GEVYRSEAYMLDIFLMTLKGYRAILQACWYLDIISYGVNWQKFYDCDPHNFPGKCSDTAALFVIAFVKADTVVEVWKGGW
QAEMGKVTGLGYQSVLSSCWYLNYISYGSDWNKYYLCEPYNFKGVASRQSLLTAQVTVPRNIDAYHHAPNN

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