Gene
| Gene Model ID | pfu_aug2.0_63.1_10206 |
|---|---|
| Locus | scaffold63.1 : 218495 ... 226590 : + |
| To GenomeBrowser | scaffold63.1:218495..226590 |
| Genes list of scaffold | scaffold63.1 |
| Synonym | pfu_aug1.0_892.1_51116 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| beta-hexosaminidase subunit beta | GO:0004553 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_63.1_10206.t1 | 2 | 1 | Glyco_hydro_20 | 1 | 68 | 0.0 | 169.2 | 3.3e-29 | 1.7e-25 | 89.9 |
| pfu_aug2.0_63.1_10206.t1 | 2 | 2 | Glyco_hydro_20 | 72 | 164 | 0.0 | 169.2 | 1.5e-25 | 7.6e-22 | 77.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_63.1_10206.t1 | gi|527245717|ref|XP_005141195.1| | PREDICTED: LOW QUALITY PROTEIN: beta-hexosaminidase subunit beta [Melopsittacus undulatus] | 0.0 |
| pfu_aug2.0_63.1_10206.t1 | gi|701296291|ref|XP_010008364.1| | PREDICTED: beta-hexosaminidase subunit beta [Nestor notabilis] | 0.0 |
| pfu_aug2.0_63.1_10206.t1 | gi|514711816|ref|XP_005011679.1| | PREDICTED: beta-hexosaminidase subunit beta, partial [Anas platyrhynchos] | 0.0 |
| pfu_aug2.0_63.1_10206.t1 | gi|363744257|ref|XP_424791.3| | PREDICTED: beta-hexosaminidase subunit beta [Gallus gallus] | 0.0 |
| pfu_aug2.0_63.1_10206.t1 | gi|729767824|ref|XP_010581112.1| | PREDICTED: beta-hexosaminidase subunit beta [Haliaeetus leucocephalus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_63.1_10206.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_63.1_10206.t1 atggcccagagtaagtttaacgtcttccactggcacatcgtagacgatcagtctttcccgtacgttagtcaagcgtttcc acagatgagccaaatgggtgcctatgatcagatgcatttgtacagtcccaatgatgtgaaggaaatcatagattatgcta gagatcgtgggatcagagtcattccagagtttgacaccccaggaaccttcggacctatagatcctactgtagattctacc ttccagttcctgaataaattctttacagaaattaaaaatgtatttcccgacaagtatgttcatctaggaggtgatgaagt ctcgttctcatgttggcagtctaacccaaacatcacagagttcatgaaacagcagaaatttggaactaactatgctaaat tggaagaatactatatgcagaaactgatagatataatgaatggtttggataaaggttacttaatatggcaggaagtgata gataatggaggaaagatgatagtcatgataccaagtatcgtcaaaggatga |
|
Protein
| Protein ID | pfu_aug2.0_63.1_10206.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_63.1_10206.t1 MAQSKFNVFHWHIVDDQSFPYVSQAFPQMSQMGAYDQMHLYSPNDVKEIIDYARDRGIRVIPEFDTPGTFGPIDPTVDST FQFLNKFFTEIKNVFPDKYVHLGGDEVSFSCWQSNPNITEFMKQQKFGTNYAKLEEYYMQKLIDIMNGLDKGYLIWQEVI DNGGKMIVMIPSIVKG |
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