Gene
| Gene Model ID | pfu_aug2.0_63.1_10207 |
|---|---|
| Locus | scaffold63.1 : 234190 ... 266564 : - |
| To GenomeBrowser | scaffold63.1:234190..266564 |
| Genes list of scaffold | scaffold63.1 |
| Synonym | pfu_aug1.0_1418.1_44027 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_63.1_10207.t1 | 2 | 1 | Sema | 75 | 493 | 0.0 | 450.4 | 0.0 | 0.0 | 449.8 |
| pfu_aug2.0_63.1_10207.t1 | 2 | 2 | Sema | 674 | 722 | 0.0 | 450.4 | 0.19 | 2700.0 | -3.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_63.1_10207.t1 | gi|676487002|ref|XP_009064155.1| | hypothetical protein LOTGIDRAFT_93097, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_63.1_10207.t1 | gi|759080379|ref|XP_011350027.1| | PREDICTED: semaphorin-1A-like isoform X3 [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_63.1_10207.t1 | gi|749781940|ref|XP_011145188.1| | PREDICTED: semaphorin-1A-like isoform X2 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_63.1_10207.t1 | gi|752880695|ref|XP_011257926.1| | PREDICTED: semaphorin-1A-like isoform X3 [Camponotus floridanus] | 0.0 |
| pfu_aug2.0_63.1_10207.t1 | gi|749781937|ref|XP_011145186.1| | PREDICTED: semaphorin-1A-like isoform X1 [Harpegnathos saltator] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_63.1_10207.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_63.1_10207.t1 atgttattgatgtcatgcagacataagagaatggatgtacgtttcaccacaaggatgttagctttgactgtggtactgac attgatgcagctgaaactgacatcgacgtggcaggtgaacatcaaagcaaacctggtcgttcctttctcagcaatacgag gtgttaagcagtttttgggtgaagagcagttttctgatcattttaaagttctgtatgctgacggacaatggctacttctt ggcgcaaggaacaaaatacacaacattagtatgtccactctggaagaaaacgtgttagagaggattgaatgggaaccgag gagtttcgataagaccgtctgtaaatcgaaagtgaagactgaggaggagtgtcagaattacatccgggtatttgggaaga agccaactggagagttatatgtttgcggcaccaatgctttcaaacctaaatgtagaacatacaaaaaatccgatgaaatg acttacgtaaaaataagggaggacgacggagtgggacagtgtccattcgatccggaacacaacagtacctcagtatactc agatggtaaactgtactcggcgactgtggctgacttttccgcccaagacccattgattcttaaagggggcgcttcccacc ttctacgtactgaacaacatgattccaaatggctaaatgatcctgattttgtgaattccttcgacattggcgataaaatt tacttcttcttcaaagaaacagctgttgagcatattaactgcgggaaggccgtgttctctcgggttggaagggtatgtaa gaccgaccaagggggacaatacctgatgagtaacgtgtggacgtcattcttcaaggctcgtcttaactgcagtataccag gagactatcctttctactttgatgaaatacagtccacttctgactatggtcaaggtaactacatgtccaccaaggacagc gctaaccggacaaacatgttttatgctgtgttccgtactccagacaacatcatgcgagcctcggctgtgtgcgcgttcag atactctgacatcgtccgaacgttcgagggcaagttcaaaggtcaggaatccccctaccacaactggctggccgtaccca gacaacagacccccacacctcacccccagagctgtgtcaacgatacgaaacgtctaactgacgtcacactcaacttcatc aagtctcacaccctgatggacgaggcggtgcccgctgctgggggaatgccggtgtttgttatgccgaccactgatagggg tcgtatgaccaaagtggccattgattggcaggtgcacgccagtgatggacggtactatgacgtcatctttgttggcacag atgacggaagagttatcaaagcgatcaataaagggcgtggtagcgaggtggagacggtagttatagaggatatacaggtc ttccccgggggtgaggctgtacgtgacctacgtatacacggcgcccgggggttgggcaagctggtggtcgtgtccaaaga cagcgtggtgtccatacctctacatcagtgtgaacaacagaaaacatgcaggttacaaaatatactggaaggaaagcacg aggcatgtggaccagaagaagtcattacaactaaaccaaatactacgccaaagccgacagaggctccaacaactgtccca tcatgcaattgtgcacaaatgacgacagttaagaaagataagccagtcgttcgaccaactgagaagccagattcagcccc agtacaagagggaaagttaggcattaaggatatacttcaaatctccattactgaggaagatgaaccaacgatatttgacg ccgggccgttaagccaaaatgataaaaatgataaaaccgaaccaaaagcaagtagccaatcagagaacaacgaatcttca ttatctgtcgcagagacggccatcgctattgttgtttccattgttctgtcatctatagcgtcatttattctgggatacaa agtacgagactgtcgcgggaatgaggaggaagccaacaataccgctaactttgcacaagactattacggttctttaacaa agaatcataataagttcaaagacaatgaacctcgttacatcaatcattcacaattacaagactctaacattaataattca caaaagcaattgaatttgctcgtgaaatattctccaaaggaatctaatttaccaaatggaagtgctccacagaagcctat ttctaacattcctacaagtattccagacaaaacgtacgtgtag |
|
Protein
| Protein ID | pfu_aug2.0_63.1_10207.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_63.1_10207.t1 MLLMSCRHKRMDVRFTTRMLALTVVLTLMQLKLTSTWQVNIKANLVVPFSAIRGVKQFLGEEQFSDHFKVLYADGQWLLL GARNKIHNISMSTLEENVLERIEWEPRSFDKTVCKSKVKTEEECQNYIRVFGKKPTGELYVCGTNAFKPKCRTYKKSDEM TYVKIREDDGVGQCPFDPEHNSTSVYSDGKLYSATVADFSAQDPLILKGGASHLLRTEQHDSKWLNDPDFVNSFDIGDKI YFFFKETAVEHINCGKAVFSRVGRVCKTDQGGQYLMSNVWTSFFKARLNCSIPGDYPFYFDEIQSTSDYGQGNYMSTKDS ANRTNMFYAVFRTPDNIMRASAVCAFRYSDIVRTFEGKFKGQESPYHNWLAVPRQQTPTPHPQSCVNDTKRLTDVTLNFI KSHTLMDEAVPAAGGMPVFVMPTTDRGRMTKVAIDWQVHASDGRYYDVIFVGTDDGRVIKAINKGRGSEVETVVIEDIQV FPGGEAVRDLRIHGARGLGKLVVVSKDSVVSIPLHQCEQQKTCRLQNILEGKHEACGPEEVITTKPNTTPKPTEAPTTVP SCNCAQMTTVKKDKPVVRPTEKPDSAPVQEGKLGIKDILQISITEEDEPTIFDAGPLSQNDKNDKTEPKASSQSENNESS LSVAETAIAIVVSIVLSSIASFILGYKVRDCRGNEEEANNTANFAQDYYGSLTKNHNKFKDNEPRYINHSQLQDSNINNS QKQLNLLVKYSPKESNLPNGSAPQKPISNIPTSIPDKTYV |
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