Gene
| Gene Model ID | pfu_aug2.0_63.1_10209 |
|---|---|
| Locus | scaffold63.1 : 347972 ... 371342 : + |
| To GenomeBrowser | scaffold63.1:347972..371342 |
| Genes list of scaffold | scaffold63.1 |
| Synonym | pfu_aug1.0_977.1_36756 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transducin-like enhancer protein 1-like | GO:0005515 GO:0005634 GO:0006355 GO:0007166 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_63.1_10209.t1 | 1 | 1 | TLE_N | 1 | 127 | 0.0 | 236.6 | 0.0 | 0.0 | 236.0 |
| pfu_aug2.0_63.1_10209.t1 | 4 | 1 | WD40 | 403 | 426 | 2.2e-19 | 68.5 | 0.0059 | 18.0 | 5.4 |
| pfu_aug2.0_63.1_10209.t1 | 4 | 2 | WD40 | 438 | 470 | 2.2e-19 | 68.5 | 1.2e-08 | 3.6e-05 | 23.4 |
| pfu_aug2.0_63.1_10209.t1 | 4 | 3 | WD40 | 476 | 512 | 2.2e-19 | 68.5 | 7.3e-13 | 2.2e-09 | 36.8 |
| pfu_aug2.0_63.1_10209.t1 | 4 | 4 | WD40 | 526 | 548 | 2.2e-19 | 68.5 | 0.00082 | 2.4 | 8.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_63.1_10209.t1 | gi|466056594|ref|XP_004279468.1| | 0.0 | |
| pfu_aug2.0_63.1_10209.t1 | gi|727063772|ref|XP_010409915.1| | PREDICTED: transducin-like enhancer protein 1 [Corvus cornix cornix] | 0.0 |
| pfu_aug2.0_63.1_10209.t1 | gi|551488485|ref|XP_005795817.1| | PREDICTED: transducin-like enhancer protein 4-like [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_63.1_10209.t1 | gi|676458098|ref|XP_009054865.1| | hypothetical protein LOTGIDRAFT_206444 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_63.1_10209.t1 | gi|149041892|gb|EDL95733.1| | transducin-like enhancer of split 3, E(spl) homolog (Drosophila), isoform CRA_a [Rattus norvegicus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_63.1_10209.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_63.1_10209.t1 atgtatcctaacagacttccgggacctcatcagtccggtcagccattcaaatttactgtcgccgagtcatgtgacagaat taaggaggaatttagcttccttcaagctcagtatcacacacttaaaatggagtgtgaaaagctagcgcaaggaaaagaag aaatgcaacggcattacgtgatgtactatgagatgtcatacggactcaacattgagatgcacaaacagactgaaatcgcc aaaagattgaatgccatttgtgcccaagttattccattcctctcacaagagcaccaacaacaggtggcagcagctgtaga gagggccaagcaggtgaccatgactgaactcaacaccatcatagggatgcaggcaggccagcatataggcggtgcccacg gtcacggtgccccacagttccccatgccgccccacccaccgggattacaacctcctctccctgtgtccagcgcctcaagt ctcctagctctacacagtagtggtggactcggaccctctcatttactcagtaaagaagacaaagatgaaaaacataaccg ctcgtctgcctccccaggggacagggacagagatcgtgagcgatacgaacacaaatatggagaaaaactttcctcccgga gccgcacccctgaagtcaacgagagcagcaaaaaacggcgagtggaggacaaaggacatgacagtgacgctgagaatgac caagacctcgtagtggacgttggggaggacaatgctggtccctctatgaacggagatctgtccccaaaagaaacaaagaa ggaaattcctgccaagaagaccacggaagataggtgtagtccacgtagtgatgcttcatctcacggaagctcggcatcca ataaacacagagattctattccaaatgagcaagcctctaccccagtatccaaaccagccacgcccaccagttcaggaaac accaccccagggccatcagctggagccagtgcaataaaacaaggtgcgtatccaccgttcatgccgggtggggcacatgg actaccggccgatatatccacaagctaccctaatggtataggtctacataataacatctcccccaatgctatgagtaact accatcgtaatatgttcccagatcctcacggagctcacggcccacatgtacgaccaggattggctaatgtccctggtgga aaaccatcaattaagttgctacaagatggacgtacgttgattgtaggaggggaagctagcacattgtctatttgggacct tgctgcacccacaccgaggattaaggcggagttgacctccagtgctccggcatgttacgctttagctatcagtcccgatt ccaaggtctgcttcagctgttgtagtgatggtaacatagcggtatgggatttacataatcagacattggtccggcagttc cagggtcacacagatggcgctagttgtattgatatatctccggacggcactaagctatggacaggcggactggacaacac tgtcaggtcatgggatctcagagagggtagacaactccagcagcatgactttagttcccagattttctcccttggttact gtcccacaggagaatggttggctgttggatccagtgattgtgatttcagacgtcagtggatatga |
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Protein
| Protein ID | pfu_aug2.0_63.1_10209.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_63.1_10209.t1 MYPNRLPGPHQSGQPFKFTVAESCDRIKEEFSFLQAQYHTLKMECEKLAQGKEEMQRHYVMYYEMSYGLNIEMHKQTEIA KRLNAICAQVIPFLSQEHQQQVAAAVERAKQVTMTELNTIIGMQAGQHIGGAHGHGAPQFPMPPHPPGLQPPLPVSSASS LLALHSSGGLGPSHLLSKEDKDEKHNRSSASPGDRDRDRERYEHKYGEKLSSRSRTPEVNESSKKRRVEDKGHDSDAEND QDLVVDVGEDNAGPSMNGDLSPKETKKEIPAKKTTEDRCSPRSDASSHGSSASNKHRDSIPNEQASTPVSKPATPTSSGN TTPGPSAGASAIKQGAYPPFMPGGAHGLPADISTSYPNGIGLHNNISPNAMSNYHRNMFPDPHGAHGPHVRPGLANVPGG KPSIKLLQDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF QGHTDGASCIDISPDGTKLWTGGLDNTVRSWDLREGRQLQQHDFSSQIFSLGYCPTGEWLAVGSSDCDFRRQWI |
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