Gene
| Gene Model ID | pfu_aug2.0_63.1_10211 |
|---|---|
| Locus | scaffold63.1 : 404662 ... 409375 : + |
| To GenomeBrowser | scaffold63.1:404662..409375 |
| Genes list of scaffold | scaffold63.1 |
| Synonym | pfu_aug1.0_977.1_36758 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_63.1_10211.t1 | 2 | 1 | zf-C3HC4 | 16 | 58 | 6.3e-08 | 32.1 | 5.1e-11 | 6.3e-08 | 32.1 |
| pfu_aug2.0_63.1_10211.t1 | 3 | 1 | zf-C3HC4_2 | 16 | 58 | 6.6e-08 | 32.4 | 5.3e-11 | 6.6e-08 | 32.4 |
| pfu_aug2.0_63.1_10211.t1 | 2 | 1 | zf-RING_2 | 16 | 58 | 5.7e-07 | 29.2 | 4.6e-10 | 5.7e-07 | 29.2 |
| pfu_aug2.0_63.1_10211.t1 | 3 | 1 | zf-C3HC4_4 | 16 | 58 | 3.7e-06 | 26.7 | 3.0e-09 | 3.7e-06 | 26.7 |
| pfu_aug2.0_63.1_10211.t1 | 4 | 1 | zf-B_box | 30 | 42 | 1.4e-09 | 37.6 | 0.037 | 46.0 | 4.0 |
| pfu_aug2.0_63.1_10211.t1 | 4 | 2 | zf-B_box | 55 | 59 | 1.4e-09 | 37.6 | 6.3 | 7800.0 | -3.2 |
| pfu_aug2.0_63.1_10211.t1 | 4 | 3 | zf-B_box | 88 | 131 | 1.4e-09 | 37.6 | 1.8e-08 | 2.2e-05 | 24.2 |
| pfu_aug2.0_63.1_10211.t1 | 2 | 2 | zf-RING_2 | 88 | 118 | 5.7e-07 | 29.2 | 0.0043 | 5.3 | 6.9 |
| pfu_aug2.0_63.1_10211.t1 | 2 | 2 | zf-C3HC4 | 89 | 117 | 6.3e-08 | 32.1 | 0.006 | 7.4 | 6.3 |
| pfu_aug2.0_63.1_10211.t1 | 3 | 2 | zf-C3HC4_2 | 89 | 117 | 6.6e-08 | 32.4 | 0.011 | 14.0 | 5.7 |
| pfu_aug2.0_63.1_10211.t1 | 3 | 2 | zf-C3HC4_4 | 97 | 118 | 3.7e-06 | 26.7 | 0.21 | 260.0 | 1.5 |
| pfu_aug2.0_63.1_10211.t1 | 4 | 4 | zf-B_box | 142 | 178 | 1.4e-09 | 37.6 | 1.9e-08 | 2.3e-05 | 24.1 |
| pfu_aug2.0_63.1_10211.t1 | 3 | 3 | zf-C3HC4_4 | 145 | 158 | 3.7e-06 | 26.7 | 1.8 | 2200.0 | -1.4 |
| pfu_aug2.0_63.1_10211.t1 | 3 | 3 | zf-C3HC4_2 | 155 | 172 | 6.6e-08 | 32.4 | 5.9 | 7200.0 | -2.9 |
| pfu_aug2.0_63.1_10211.t1 | 6 | 1 | NHL | 417 | 432 | 1.3e-08 | 34.3 | 0.16 | 200.0 | 2.2 |
| pfu_aug2.0_63.1_10211.t1 | 6 | 2 | NHL | 454 | 464 | 1.3e-08 | 34.3 | 4.2 | 5200.0 | -2.3 |
| pfu_aug2.0_63.1_10211.t1 | 6 | 3 | NHL | 481 | 489 | 1.3e-08 | 34.3 | 7.8 | 9700.0 | -3.1 |
| pfu_aug2.0_63.1_10211.t1 | 6 | 4 | NHL | 516 | 538 | 1.3e-08 | 34.3 | 4.2 | 5200.0 | -2.3 |
| pfu_aug2.0_63.1_10211.t1 | 6 | 5 | NHL | 563 | 587 | 1.3e-08 | 34.3 | 6.8e-08 | 8.4e-05 | 22.3 |
| pfu_aug2.0_63.1_10211.t1 | 6 | 6 | NHL | 609 | 624 | 1.3e-08 | 34.3 | 0.0087 | 11.0 | 6.2 |
Transcript
| Transcript ID | pfu_aug2.0_63.1_10211.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_63.1_10211.t1 atggataggaaaagaacattagatttccttttgaaaaacgtgaggtgctacttatgtttggaccagtttcgggatcccag actgctggactgtcaccattcatactgcagaaaatgtctggagagctatgtggccacagtgagtaatgaaggtgtcattg aatgtccattgtgcgatgtcgaaacagaaacacccaaaaaaggagtttcgcaattggagaaaaacatctattacgccatc agtcaacaggaaatgggggtgtcgtgtgctgtctgtggtgaacaagaatttgcgaaaggacactgtatggattgtaacca ggatttctgtgagaattgtctaaaatctcattctgggatgacagcgacaagagagcatcacattgtctcaatagggaggg acaacctaggagggaaggtcacccggaaccacttttgtaagacgcacacagaagagaaattatgttacttttgtacgact tgccaaaaactcgtatgccaacactgcaacatgacaaaccacaagcaccataagtccaaatactacactgaaattaccga tgtcagcagaaaacggctgaaggaggtggtgtcgtcgatggagtatatcaactacttctgctggctggcagagaggaagg aagaattctctcaacagatccagaaatacaaaaaggcagaagaaaaggcatacgctgatgttgatactcatgcagagctc ctacactccatggtggaacaaacacgacagaagatgctggacacgatagcagacgacaccaagaagatcatccagcctgc caaagacgccatcaaactgatagagaaaaacatcttgtcaataacagggatatatttgtatgcaagaaatgttgccaacc agggtgatgacgttacagtagtcgacaaaagttcccgagttagaacaaaactggaaaagatgaaatcttcaaaattgctt cctactttggagccgaataccgttcagcatttcgtaccacacccggttactgtggaagagatccagtcaatctatggtga aataaagagaggggtaacggagacagacgataaaaagtcagaatgcctcatgcggttcgaattagatgacgaggaaacta caatatcttctatactacctactgaggacggcagggcatggcttattgagggtgtgggaggactgctgaggctgtatgat acggagggcaggattcataatactcttcgtcttggcgtacaagcagacgacatggcgatgacggatgacggcacaatcct tgtgtcctgtaattcagctaaagaaatcaaagccatcgacgaaaggcttcgaataaaatcattcgtcaacacgccatact gtgctagaggattagcactggacaataaatgttcgtctctcttcatatgtacaacagagaaaaatgccttcttcgatcat gatgccacgcataacaaccaagttgttcgcaccatgctgggtgatagcaaacgatgggaagtaccagacattctggaatt ttcctccagtccaacagtcgagtaccctgctcgagcagtcgtcacgaaaaacggatacatcgcgatatctgactggaaaa gagaatgtgtgacaatactggacggtacaggacacatcgagacagaatatttcggacttcggaaagggagagacaacgac cacttttgtccacgtggtatatgttgcagcaaatctgatggcaggctactagtcgccgactataacaccagtcgtataat tcagatcgacgaaaccggtcagatattccagacggtgctaacaaaagctgacggcatccacaagccatggtccgtctcag taggtgttgacggattattatgggtaggaaacaagcaaggaagcgtgcaggtctttcagcttcaatga |
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Protein
| Protein ID | pfu_aug2.0_63.1_10211.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_63.1_10211.t1 MDRKRTLDFLLKNVRCYLCLDQFRDPRLLDCHHSYCRKCLESYVATVSNEGVIECPLCDVETETPKKGVSQLEKNIYYAI SQQEMGVSCAVCGEQEFAKGHCMDCNQDFCENCLKSHSGMTATREHHIVSIGRDNLGGKVTRNHFCKTHTEEKLCYFCTT CQKLVCQHCNMTNHKHHKSKYYTEITDVSRKRLKEVVSSMEYINYFCWLAERKEEFSQQIQKYKKAEEKAYADVDTHAEL LHSMVEQTRQKMLDTIADDTKKIIQPAKDAIKLIEKNILSITGIYLYARNVANQGDDVTVVDKSSRVRTKLEKMKSSKLL PTLEPNTVQHFVPHPVTVEEIQSIYGEIKRGVTETDDKKSECLMRFELDDEETTISSILPTEDGRAWLIEGVGGLLRLYD TEGRIHNTLRLGVQADDMAMTDDGTILVSCNSAKEIKAIDERLRIKSFVNTPYCARGLALDNKCSSLFICTTEKNAFFDH DATHNNQVVRTMLGDSKRWEVPDILEFSSSPTVEYPARAVVTKNGYIAISDWKRECVTILDGTGHIETEYFGLRKGRDND HFCPRGICCSKSDGRLLVADYNTSRIIQIDETGQIFQTVLTKADGIHKPWSVSVGVDGLLWVGNKQGSVQVFQLQ |
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