Gene
| Gene Model ID | pfu_aug2.0_63.1_10212 |
|---|---|
| Locus | scaffold63.1 : 411905 ... 418751 : - |
| To GenomeBrowser | scaffold63.1:411905..418751 |
| Genes list of scaffold | scaffold63.1 |
| Synonym | pfu_aug1.0_977.1_36759 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| t-complex protein 1 subunit gamma isoform x3 | GO:0000166 GO:0005737 GO:0043226 GO:0043234 GO:0044267 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_63.1_10212.t1 | 2 | 1 | Cpn60_TCP1 | 3 | 119 | 0.0 | 434.4 | 1.8e-37 | 2.7e-33 | 115.3 |
| pfu_aug2.0_63.1_10212.t1 | 2 | 2 | Cpn60_TCP1 | 120 | 412 | 0.0 | 434.4 | 0.0 | 0.0 | 320.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_63.1_10212.t1 | gi|156368061|ref|XP_001627515.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_63.1_10212.t1 | gi|585695404|ref|XP_006895819.1| | PREDICTED: T-complex protein 1 subunit gamma isoform X3 [Elephantulus edwardii] | 0.0 |
| pfu_aug2.0_63.1_10212.t1 | gi|507980424|ref|XP_004693904.1| | 0.0 | |
| pfu_aug2.0_63.1_10212.t1 | gi|395845151|ref|XP_003795306.1| | 0.0 | |
| pfu_aug2.0_63.1_10212.t1 | gi|560896293|ref|XP_006174615.1| | PREDICTED: T-complex protein 1 subunit gamma isoform X3 [Camelus ferus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_63.1_10212.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_63.1_10212.t1 atggaccccatgggcggtatcgtgatgaccaatgatggtaatgcaatactcagagagattaatgtacaacatccggctgc caagtccatgatagaggtagctaggactcaggatgaagaggtgggagacggcaccacatctgtcattatcctaggtggag aggtgttatcagtagcggagccattcctagaacaacagatgcatccaacagttataatcagtgcatttagacaagcctta gaagatctgatagacatccttagggaaaaagtcagcactccagtagatgtaacaaacagatcagagatgatgaaaattgt caaaagctgtgtgggcacaaagttcatcagcaaatggcgtatagaaaaacctaggattctattattggattgtaatttag aatacaagaaaggagagagtcagacaaacatagaaataactaaagaagaagatttcagtaaaatccttcagatggaagaa gaattcgtaaggaagatgtgtgatgaagtaatcgctgtcaaacctgacttagtaatcacagaaaaaggtgtgtccgatct ggctcagcatttcctggtcaaggccggtataagctgtatacgacgtgtcagaaagtccgataataacaggatagcaaggg tttgtggagctaccattgtaaataggacggatgaaatccgtgaggaagatgttggtacagactgtggcttgttttacatc gagaaaataggagatgaatattttaccttcttggttgagtgtaagaatcctaaagcttgtacgatcctgctccgaggggc cagtaaggacatcttgatggaggtagagagaaacctccaggatgccatgaacgtggctcgtaatgttctgttagaacccc tccttgttccagggggaggggcagcagaaatggcagctgctcaggtattgaatgaaaaagccaagagtatcaaaggtgtt catcagtggccgtacaaagccgtcaatcgagcccttgaggtcatccctcgtacactcatacagaactgtggagcaaatac catcagaactataactgcattaagggctaagcatgcatcaccaaacaatacaacatggggtattgatggagagactggta aaatagtcgacatgaaggaatatggaatctgggaaccttttgctgtcaagtctcaaatttacaaaactgcaatagagaca gcagtattattactgaggattgacgacatcgtatcaggaacaaagaaacagagtgacgctgctgctggcggacgacccgc tggacctaccggagaagacgcccctcaagcttccgagggtcctgatccttga |
|
Protein
| Protein ID | pfu_aug2.0_63.1_10212.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_63.1_10212.t1 MDPMGGIVMTNDGNAILREINVQHPAAKSMIEVARTQDEEVGDGTTSVIILGGEVLSVAEPFLEQQMHPTVIISAFRQAL EDLIDILREKVSTPVDVTNRSEMMKIVKSCVGTKFISKWRIEKPRILLLDCNLEYKKGESQTNIEITKEEDFSKILQMEE EFVRKMCDEVIAVKPDLVITEKGVSDLAQHFLVKAGISCIRRVRKSDNNRIARVCGATIVNRTDEIREEDVGTDCGLFYI EKIGDEYFTFLVECKNPKACTILLRGASKDILMEVERNLQDAMNVARNVLLEPLLVPGGGAAEMAAAQVLNEKAKSIKGV HQWPYKAVNRALEVIPRTLIQNCGANTIRTITALRAKHASPNNTTWGIDGETGKIVDMKEYGIWEPFAVKSQIYKTAIET AVLLLRIDDIVSGTKKQSDAAAGGRPAGPTGEDAPQASEGPDP |
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