Gene
| Gene Model ID | pfu_aug2.0_63.1_10213 |
|---|---|
| Locus | scaffold63.1 : 424632 ... 458567 : + |
| To GenomeBrowser | scaffold63.1:424632..458567 |
| Genes list of scaffold | scaffold63.1 |
| Synonym | pfu_aug1.0_977.1_36760 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_63.1_10213.t1 | 2 | 1 | DUF3697 | 521 | 552 | 8.5e-10 | 38.1 | 1.5e-13 | 2.2e-09 | 36.7 |
| pfu_aug2.0_63.1_10213.t1 | 2 | 2 | DUF3697 | 736 | 756 | 8.5e-10 | 38.1 | 0.35 | 5100.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_63.1_10213.t1 | gi|524875179|ref|XP_005094320.1| | PREDICTED: protein lingerer-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_63.1_10213.t1 | gi|524875175|ref|XP_005094318.1| | PREDICTED: protein lingerer-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_63.1_10213.t1 | gi|524875181|ref|XP_005094321.1| | PREDICTED: protein lingerer-like isoform X4 [Aplysia californica] | 0.0 |
| pfu_aug2.0_63.1_10213.t1 | gi|524875183|ref|XP_005094322.1| | PREDICTED: protein lingerer-like isoform X5 [Aplysia californica] | 0.0 |
| pfu_aug2.0_63.1_10213.t1 | gi|676423133|ref|XP_009044061.1| | hypothetical protein LOTGIDRAFT_228067 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_63.1_10213.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_63.1_10213.t1 atgagtgcagcggtttctaaccgtgccaatcataggcctagcaaggaaaaacacgcaaagatgacagttagtcaaccaac acaaccaaaggcagattgtccccctccacaagccaaggcgactccagaacagctgagaatagctatgataacttcagacg accataaagatgatttggagtttcagaaaaagctagaacagggtgtaggagagtggaaagaaacaggtaagaagaaaaaa cgtcaacaacagtcgacacctacaccctcaaagccagagcctctgtcaaaccacgtggaagaaaaaccacaaaaggacga acaaaatacagattcggagagacctgaccgaagggatagggaaaataaagataacagaaaaggtagacgatttgacagtc gaccacctcgcctatctcgagggaggggtagagataaaccagagttctttagaggagacagagaaagaatgaatggagag aatgataatagtgacagcaattttggaacgttcagagaaggagggtttgatgacagtagagggagaggtcgtggacgagg ggggaggggccgaggaagaggtgggcggggccgtgagagaggcggaggaccaggaagtggaaggggaggatcaaggagct ttgagaggggacagcagaaatttgatataggaccacaaattgatacatggaccaatgagacagctgaaaatgctgagaaa gaaccttctataggtgcttggggcgatatggaagattggaatgaggaccagtgggctggaaatcttaaagaatccaaagt tttcacagcatctacaacacaaagcagtactgtggtagataattctggtgcaattaacgactcaaactctataggacaga ggttagaccttggtgcattactgaacaaacagcaaaacgagaccgattcctacatcagccaatacaatcaacaggctacc gagaccatcaaaaataccatagggattggttccaattcccgacaaaattattccaatcaagaatcttcacgatcgacgta ccaggagtccccgcgttcctcctataacagtcaggaccagacatcgttcggtggacaaggattctccagtcaggattcta ggtcatttaacagccaggatagcaggcagccatattctggtcaggattcccgtagtgtttactccagccaagatacacgg cagtcctatcaggaatcccgatcgccattcagcagccaggaatctcgtcagtcgtacaacgactcgggaagacagagtta tactaacacagccatcacaaatcatctacagtcctcgtcattagctagtcagatacaagctccatcaccgaccttagtaa gtcagttatcggagagttctgcagcctcggcagctgtagacgcattggtatcgtcccttacccaaggtcagaatctcact accactgcattagaacagattggtaacagcagtgtactgcctgtgtctcagagctccacgcctgaccccaccccccaggc catgcagcaaagacccaaaccacaaagatcaaaactgccaccgccatcaaagattccagcttctgcagttgaaatgccag gtcatcagcgaacaaatgtagatgtacagtttgggaactgggagtttggtgctgactcgtccccgttctcatttggaggg agtgaatctacatcagtggacaatatagccagtactttatccagcagtaacagctcatcaatgaacaaccatttgtctca agccaataaacaaagcgaatctgtgatgtcgtccaatcgtatgaccccccctaacactggttcatcgtcgatatctaccc aagactcgcctcgacaaaacatgttccagaattccccctacacaacaccaacaaaacaagatacagcctcgctcgctcag aaaaatataagtcctccggagcctataccattccctcctgacaggaaatccagtcctctggtaccgacacaaagaccaag ttccaacagctcactccctcagggctccgtcagtaccagcaagcaggacagtggtttgagttattcccagactgcaccag gctcttatcaatccacctaccaccaacaatctaactccgttctctcaagttcttcaggattatcaaactctatgggaatg cctagagaggctccaggattaaatagggatactaacgctttacaaaactcgtcgattcctagagattccgttagtttaag tggtgctagtctgtctatggatggtacgacattaaatagcagtgccatgtcaagagactctgtgggcatgtcaggtgcat ctgtgttaacgagctcatcgtctctaacgaacagtacaggattatctcacgattcagacagtctatctaatagtgctcct ttaggaagctcaggtggcatgtcaagcacctcagggctttcaaacgcgggaaatttaactggtaatagtggcttaaaaaa tacatcaggattttcatcttcatctcagccgagttcttaccaaaatcaatacccatctgggtccaaccaatatcaagcta gtcagagccagtttaatcaatctggctccaatcagtaccatcagtctggctccagccagtactcgggtcagaatcagtat caaagttatggacagtctggtagccagtaccagaaccagggatcttactctggtggcagtagttacggtacttcatctca atccaaccagaattctttataccaaacaccagtgtctaactcataccaggggtcggggagctcactatatcactccggca gctcctcccagggctcctaccagcagtcctcacagtcaggttaccacacaaagagggagtcccaggccccagggtcgtat tcagcgaacgccactcagagctcgtcaggagcatatcagcgagactcccagacaggactctcagttccgagctcacaggg tcagatggcttcttactcctcacaaaactatcagaacaatctgacctctaatttacagacttcacctcttaatgcatccc aaattagtgagactctgtcaaaaatgtctgtgaaagagaattccttggatactagacaatcaccacaatttgagaattcc ccatcaacgaccagcagttctttaccaactaccacaggttcctctacattatcatcgggtaaaagtacgccatcggccgt tacgtctactgtgataacgacaagtaccgtcagctctaccagggtcagcaacactaactttacttcacctacaggatcaa taacaagtaaagctcctcccaacttgcctcccggtgtaccagtgttaggacatcaatacataatgaatcaaggaactcta ccttactttgctggtttacaacaaccactgtatggatatgatgagcttcagatgttacagcagaggttacctcccttgag ttataattatgatctaactggtttcggtgtaccaacttcggttcaaggtagagatcaaacaacaataggaaatgtttctt atacaggtgctgataataagatgcagcgagttgaagcccagtcccctataccatctactaacacacagcagtccaacacc tcgtcaggaagccaccaacagcaacaacattttaacatcttcccgtacggttattattatccctcggtacttcctaacgc tgctgctgctgccgcaggtttccagttcccacaagctgtctttcctgtccccccggtgactaacgctgcacatgctggta caacggctaacactcaatttcagaaaacatatggatctcatacatatgtaggaaataaaggttacgatgatttaacggca cagaacgcagatttcggtaaatcaggttacggccagtcccagaacaaagtatctgctgtatcagctggcagtgtatccgg gttaccagggacaggagagttgagcggctcagcgtacggcaaatcacacacacagatggtaaacgcaagtgaacgtctga ataaaacgtacgctcgaggaccgcggaccaaccatgatggctttgacaagcaagcctttcatgcagggacaccacctccc tttaacctgcctctagccaccggtacacaagctggccctttaggagcccctgctaccccgtatggaaccccgtttgtacc catgatgcctcaccaggcccattcacagctgatgcatcctggtctacaacaggactctagcagtggttctagccgaggct cccatttactgggtcagcagagtactacacagagtaaagccacggctggcaaggcttacaacacaggatactggggaacc aactag |
|
Protein
| Protein ID | pfu_aug2.0_63.1_10213.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_63.1_10213.t1 MSAAVSNRANHRPSKEKHAKMTVSQPTQPKADCPPPQAKATPEQLRIAMITSDDHKDDLEFQKKLEQGVGEWKETGKKKK RQQQSTPTPSKPEPLSNHVEEKPQKDEQNTDSERPDRRDRENKDNRKGRRFDSRPPRLSRGRGRDKPEFFRGDRERMNGE NDNSDSNFGTFREGGFDDSRGRGRGRGGRGRGRGGRGRERGGGPGSGRGGSRSFERGQQKFDIGPQIDTWTNETAENAEK EPSIGAWGDMEDWNEDQWAGNLKESKVFTASTTQSSTVVDNSGAINDSNSIGQRLDLGALLNKQQNETDSYISQYNQQAT ETIKNTIGIGSNSRQNYSNQESSRSTYQESPRSSYNSQDQTSFGGQGFSSQDSRSFNSQDSRQPYSGQDSRSVYSSQDTR QSYQESRSPFSSQESRQSYNDSGRQSYTNTAITNHLQSSSLASQIQAPSPTLVSQLSESSAASAAVDALVSSLTQGQNLT TTALEQIGNSSVLPVSQSSTPDPTPQAMQQRPKPQRSKLPPPSKIPASAVEMPGHQRTNVDVQFGNWEFGADSSPFSFGG SESTSVDNIASTLSSSNSSSMNNHLSQANKQSESVMSSNRMTPPNTGSSSISTQDSPRQNMFQNSPYTTPTKQDTASLAQ KNISPPEPIPFPPDRKSSPLVPTQRPSSNSSLPQGSVSTSKQDSGLSYSQTAPGSYQSTYHQQSNSVLSSSSGLSNSMGM PREAPGLNRDTNALQNSSIPRDSVSLSGASLSMDGTTLNSSAMSRDSVGMSGASVLTSSSSLTNSTGLSHDSDSLSNSAP LGSSGGMSSTSGLSNAGNLTGNSGLKNTSGFSSSSQPSSYQNQYPSGSNQYQASQSQFNQSGSNQYHQSGSSQYSGQNQY QSYGQSGSQYQNQGSYSGGSSYGTSSQSNQNSLYQTPVSNSYQGSGSSLYHSGSSSQGSYQQSSQSGYHTKRESQAPGSY SANATQSSSGAYQRDSQTGLSVPSSQGQMASYSSQNYQNNLTSNLQTSPLNASQISETLSKMSVKENSLDTRQSPQFENS PSTTSSSLPTTTGSSTLSSGKSTPSAVTSTVITTSTVSSTRVSNTNFTSPTGSITSKAPPNLPPGVPVLGHQYIMNQGTL PYFAGLQQPLYGYDELQMLQQRLPPLSYNYDLTGFGVPTSVQGRDQTTIGNVSYTGADNKMQRVEAQSPIPSTNTQQSNT SSGSHQQQQHFNIFPYGYYYPSVLPNAAAAAAGFQFPQAVFPVPPVTNAAHAGTTANTQFQKTYGSHTYVGNKGYDDLTA QNADFGKSGYGQSQNKVSAVSAGSVSGLPGTGELSGSAYGKSHTQMVNASERLNKTYARGPRTNHDGFDKQAFHAGTPPP FNLPLATGTQAGPLGAPATPYGTPFVPMMPHQAHSQLMHPGLQQDSSSGSSRGSHLLGQQSTTQSKATAGKAYNTGYWGT N |
|