Gene
| Gene Model ID | pfu_aug2.0_63.1_10214 |
|---|---|
| Locus | scaffold63.1 : 460523 ... 471951 : - |
| To GenomeBrowser | scaffold63.1:460523..471951 |
| Genes list of scaffold | scaffold63.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_63.1_10214.t1 | 3 | 1 | Ig_2 | 2 | 66 | 4.5e-18 | 65.1 | 0.0024 | 6.0 | 7.0 |
| pfu_aug2.0_63.1_10214.t1 | 3 | 1 | I-set | 51 | 67 | 6.1e-23 | 80.4 | 0.049 | 120.0 | 2.6 |
| pfu_aug2.0_63.1_10214.t1 | 3 | 1 | ig | 51 | 63 | 1.1e-12 | 47.9 | 0.43 | 1100.0 | -0.2 |
| pfu_aug2.0_63.1_10214.t1 | 3 | 1 | Ig_3 | 51 | 66 | 1.1e-11 | 45.0 | 1.5 | 3800.0 | -1.6 |
| pfu_aug2.0_63.1_10214.t1 | 3 | 1 | V-set | 51 | 66 | 1.2e-11 | 44.4 | 0.14 | 350.0 | 1.1 |
| pfu_aug2.0_63.1_10214.t1 | 3 | 2 | I-set | 111 | 160 | 6.1e-23 | 80.4 | 2.1e-08 | 5.1e-05 | 23.0 |
| pfu_aug2.0_63.1_10214.t1 | 3 | 2 | Ig_2 | 111 | 153 | 4.5e-18 | 65.1 | 3.2e-06 | 0.0078 | 16.3 |
| pfu_aug2.0_63.1_10214.t1 | 3 | 2 | ig | 112 | 151 | 1.1e-12 | 47.9 | 5.7e-05 | 0.14 | 12.2 |
| pfu_aug2.0_63.1_10214.t1 | 3 | 2 | Ig_3 | 118 | 150 | 1.1e-11 | 45.0 | 0.0087 | 22.0 | 5.6 |
| pfu_aug2.0_63.1_10214.t1 | 3 | 2 | V-set | 118 | 155 | 1.2e-11 | 44.4 | 1.9e-05 | 0.048 | 13.5 |
| pfu_aug2.0_63.1_10214.t1 | 3 | 3 | Ig_3 | 173 | 249 | 1.1e-11 | 45.0 | 2.7e-12 | 6.7e-09 | 36.1 |
| pfu_aug2.0_63.1_10214.t1 | 3 | 3 | I-set | 182 | 261 | 6.1e-23 | 80.4 | 2.8e-17 | 6.9e-14 | 51.4 |
| pfu_aug2.0_63.1_10214.t1 | 3 | 3 | Ig_2 | 183 | 262 | 4.5e-18 | 65.1 | 4.9e-13 | 1.2e-09 | 38.1 |
| pfu_aug2.0_63.1_10214.t1 | 3 | 3 | V-set | 183 | 250 | 1.2e-11 | 44.4 | 3.5e-09 | 8.7e-06 | 25.6 |
| pfu_aug2.0_63.1_10214.t1 | 3 | 3 | ig | 189 | 247 | 1.1e-12 | 47.9 | 1.5e-11 | 3.6e-08 | 33.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_63.1_10214.t1 | gi|524914926|ref|XP_005112272.1| | PREDICTED: neuroplastin-like isoform X1 [Aplysia californica] | 2.0e-31 |
| pfu_aug2.0_63.1_10214.t1 | gi|524914928|ref|XP_005112273.1| | PREDICTED: neuroplastin-like isoform X2 [Aplysia californica] | 3.0e-31 |
| pfu_aug2.0_63.1_10214.t1 | gi|241833897|ref|XP_002414953.1| | secreted protein, putative [Ixodes scapularis] | 8.0e-31 |
| pfu_aug2.0_63.1_10214.t1 | gi|676463817|ref|XP_009056719.1| | hypothetical protein LOTGIDRAFT_233029 [Lottia gigantea] | 3.0e-29 |
| pfu_aug2.0_63.1_10214.t1 | gi|260813635|ref|XP_002601522.1| | hypothetical protein BRAFLDRAFT_127723 [Branchiostoma floridae] | 7.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_63.1_10214.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_63.1_10214.t1 atgcttaagtgtacatattctgatggatccactgtacagaatccacttgatgaaaagctgaagttgttcaaaggtgctaa tgaagttcagggtgttgaactcatggctggattaacggttcaagaactggtcctcaagtacacaaaagacaagatgactc ctgcagacgcagatgattataaatgtaaatttgagaacattgaattcaagatagaagtcatggttttagctgtcacaaaa gtagaagctgtatacaacgcatcattaaaagatgccaagtatgacctgaagtgtgaggagagtataaccgggccggccat catcagccgagactttactgtgatgtggtcaaagaacggcactactcttagtggcaacagatttgtacagaataaaacag tccttactataaaggaagcagaggccactgatgtaggaagttacagatgttcctttgagtttgaagtcggaagtaaacga gttatccttgataacacagtcgatttcaaaggcctaccagtaattgacagcaagaaactgggtgagtccagaaacgtgat gcagggagacaagatggagttgatttgtcctttatctggatacccagaatctgacgtcgtgtggttacgtaatagtgatg ttctcgagaagaaaggatccatcaacttttcttctaataacgtaactctaactatatatcacctggagtttgaacacagg ggcacctacacttgtagggccaataactctgtgggtgttacggaggcttccattatcatcagggttaaagaccgactagc agctttatggccgtttttgggaatcgttgctgaggtcatcgtcctttgtataattatcttcatctatgagaagaaaagga gtaaggagctggaagatgaaacagatggagctgatgacgtaggaaatgctgtagataccaagggtaacgatgaagtcaga caacgtaacgtacgaacctaa |
|
Protein
| Protein ID | pfu_aug2.0_63.1_10214.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_63.1_10214.t1 MLKCTYSDGSTVQNPLDEKLKLFKGANEVQGVELMAGLTVQELVLKYTKDKMTPADADDYKCKFENIEFKIEVMVLAVTK VEAVYNASLKDAKYDLKCEESITGPAIISRDFTVMWSKNGTTLSGNRFVQNKTVLTIKEAEATDVGSYRCSFEFEVGSKR VILDNTVDFKGLPVIDSKKLGESRNVMQGDKMELICPLSGYPESDVVWLRNSDVLEKKGSINFSSNNVTLTIYHLEFEHR GTYTCRANNSVGVTEASIIIRVKDRLAALWPFLGIVAEVIVLCIIIFIYEKKRSKELEDETDGADDVGNAVDTKGNDEVR QRNVRT |
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