Gene
| Gene Model ID | pfu_aug2.0_6300.1_02833 |
|---|---|
| Locus | scaffold6300.1 : 1 ... 1125 : - |
| To GenomeBrowser | scaffold6300.1:1..1125 |
| Genes list of scaffold | scaffold6300.1 |
| Synonym | pfu_aug1.0_7659.1_45702 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_6300.1_02833.t1 | 2 | 1 | zf-B_box | 17 | 58 | 4.4e-15 | 55.2 | 2.1e-08 | 5.3e-05 | 23.0 |
| pfu_aug2.0_6300.1_02833.t1 | 2 | 2 | zf-B_box | 73 | 109 | 4.4e-15 | 55.2 | 5.1e-13 | 1.3e-09 | 37.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_6300.1_02833.t1 | gi|347965727|ref|XP_321817.5| | AGAP001328-PA [Anopheles gambiae str. PEST] | 2.0e-11 |
| pfu_aug2.0_6300.1_02833.t1 | gi|260832802|ref|XP_002611346.1| | hypothetical protein BRAFLDRAFT_210899 [Branchiostoma floridae] | 2.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_6300.1_02833.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_6300.1_02833.t1 atggcgtttgcctcgtcaagaatagacgcacaggaggctattataaagccatgtgacttatgtgaagatgacgagaacgt caactggttctgtaaggactgttatcaaaatctatgtgacagatgtgaaaggtctcatctacgaagtaatgtttcaaagt cacacatcatactttcgatttccgaaggatttgatttggggaaaaggaatttatcggacatttgtcaagatcatgacgaa ctatttacctttttttgcagaacttgtgataggaacatttgttcgaaatgtttgtcaacgaaacataaaaagcatgactt cgtagatttacgtgagcgtcaatctgatgtacagaaacatttagatgacgtcatcaaagaaaaggaaacagaaaagcaga tgatgacaagaaattttgatgatttggttcagcatgaaatccaatcagagaagaaaaataaagacgagtgtgccataatc aatgaccgaattaaagacattaaaatggccgccgatgaggaagggggaaaaatcataagatcccttaattcaacaaaaca acaggaagacaaagaggtcaaagacggtaaacataagatccagacccagaccggactctatgacaaagagatccaatccg tacaacaagaactccgactccagacagcgtcatcattacacggcttcgtcacggaatcaatgaaaaaacttaagtcattg aagccggtatctattgcgataccagacaaacaacaattaccgtttgaaggagtcgaaggcaatcatattcgagaaacgat tggaaaactatttggatcacaaaatgtatcggtaacagagaatactaaaggcagagaaggaacgaaatgcaacgtgtttt caaatttagagataatcagaacattcaacatagacagaaatgtaatttgttattcaatgtgtcttagccctgatggtagt atatggatttgtagttatagatacgtgtacaagatgagctctgactgctctacagtcctccatcagttacctactagaat gagttatacctgtggttacatagcgt |
|
Protein
| Protein ID | pfu_aug2.0_6300.1_02833.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_6300.1_02833.t1 MAFASSRIDAQEAIIKPCDLCEDDENVNWFCKDCYQNLCDRCERSHLRSNVSKSHIILSISEGFDLGKRNLSDICQDHDE LFTFFCRTCDRNICSKCLSTKHKKHDFVDLRERQSDVQKHLDDVIKEKETEKQMMTRNFDDLVQHEIQSEKKNKDECAII NDRIKDIKMAADEEGGKIIRSLNSTKQQEDKEVKDGKHKIQTQTGLYDKEIQSVQQELRLQTASSLHGFVTESMKKLKSL KPVSIAIPDKQQLPFEGVEGNHIRETIGKLFGSQNVSVTENTKGREGTKCNVFSNLEIIRTFNIDRNVICYSMCLSPDGS IWICSYRYVYKMSSDCSTVLHQLPTRMSYTCGYIA |
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