Gene
| Gene Model ID | pfu_aug2.0_631.1_04411 |
|---|---|
| Locus | scaffold631.1 : 30508 ... 34985 : - |
| To GenomeBrowser | scaffold631.1:30508..34985 |
| Genes list of scaffold | scaffold631.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_631.1_04411.t1 | 2 | 1 | zf-B_box | 17 | 54 | 7.7e-08 | 32.1 | 6.2e-11 | 7.7e-08 | 32.1 |
| pfu_aug2.0_631.1_04411.t1 | 2 | 2 | zf-B_box | 160 | 168 | 7.7e-08 | 32.1 | 7.2 | 8900.0 | -3.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_631.1_04411.t1 | gi|637256185|ref|XP_008122684.1| | PREDICTED: tripartite motif-containing protein 67 isoform X2 [Anolis carolinensis] | 1.0e-06 |
| pfu_aug2.0_631.1_04411.t1 | gi|637256193|ref|XP_008122694.1| | PREDICTED: tripartite motif-containing protein 67 isoform X4 [Anolis carolinensis] | 2.0e-06 |
| pfu_aug2.0_631.1_04411.t1 | gi|637256181|ref|XP_008122680.1| | PREDICTED: tripartite motif-containing protein 67 isoform X1 [Anolis carolinensis] | 2.0e-06 |
| pfu_aug2.0_631.1_04411.t1 | gi|637256189|ref|XP_003215923.2| | PREDICTED: tripartite motif-containing protein 67 isoform X3 [Anolis carolinensis] | 2.0e-06 |
| pfu_aug2.0_631.1_04411.t1 | gi|602671635|ref|XP_007441329.1| | PREDICTED: tripartite motif-containing protein 67 [Python bivittatus] | 2.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_631.1_04411.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_631.1_04411.t1 atgtgtgatgccagtgagacaacttcgagtgattttgtacaaatgccattacgcatttgtaatattcatgaatttgagga gttggtagtgttttgtaaaacctgttggatacctgtatgcgtacagtgttctagggaaggacatcttgagcacgaatgtg aaggtctaggaaaagtcgctcgagatgtgcgtcttcagattcccgaaacttgtcgacagattgaacaagacgtcatagaa acaatgaaaatgcaactacaaaatttaaaattacaacaagcagaaaatgatacgcaatatgcgaatgacatggcaagtct tgagcagattaaaatgaagttgattgggcaggtgaaatcgttttttgaaagaaagcgatctgaatgtcaggcaagattaa atgtccttgacaataaactgagggaacatgagaagaaactggatcaggacatttcaacaattgaacagcgaataaaacat cacgaagaatctatttcattctatggaaattttgatgtaatagaaatggatacagaactcaaagaaatggctaaagatta cctgtctacaggtcttgtccaaatgacatatgaacggatgaacatgacatctctaaaacaggagttatctgagttgatga gctctgttacattatag |
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Protein
| Protein ID | pfu_aug2.0_631.1_04411.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_631.1_04411.t1 MCDASETTSSDFVQMPLRICNIHEFEELVVFCKTCWIPVCVQCSREGHLEHECEGLGKVARDVRLQIPETCRQIEQDVIE TMKMQLQNLKLQQAENDTQYANDMASLEQIKMKLIGQVKSFFERKRSECQARLNVLDNKLREHEKKLDQDISTIEQRIKH HEESISFYGNFDVIEMDTELKEMAKDYLSTGLVQMTYERMNMTSLKQELSELMSSVTL |
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