Gene
| Gene Model ID | pfu_aug2.0_631.1_04412 |
|---|---|
| Locus | scaffold631.1 : 45483 ... 78015 : - |
| To GenomeBrowser | scaffold631.1:45483..78015 |
| Genes list of scaffold | scaffold631.1 |
| Synonym | pfu_aug1.0_25975.1_11733 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_631.1_04412.t1 | 3 | 1 | FbpA | 8 | 118 | 2.0e-25 | 89.2 | 3.7e-20 | 1.4e-16 | 60.1 |
| pfu_aug2.0_631.1_04412.t1 | 3 | 2 | FbpA | 221 | 455 | 2.0e-25 | 89.2 | 8.0e-13 | 3.0e-09 | 35.9 |
| pfu_aug2.0_631.1_04412.t1 | 2 | 1 | DUF3441 | 418 | 456 | 8.6e-31 | 105.8 | 0.95 | 3500.0 | -2.5 |
| pfu_aug2.0_631.1_04412.t1 | 2 | 1 | DUF814 | 432 | 456 | 1.8e-25 | 88.5 | 0.65 | 2400.0 | -1.6 |
| pfu_aug2.0_631.1_04412.t1 | 2 | 2 | DUF814 | 471 | 569 | 1.8e-25 | 88.5 | 2.1e-28 | 7.6e-25 | 86.6 |
| pfu_aug2.0_631.1_04412.t1 | 3 | 3 | FbpA | 731 | 769 | 2.0e-25 | 89.2 | 4.0 | 15000.0 | -17.7 |
| pfu_aug2.0_631.1_04412.t1 | 2 | 2 | DUF3441 | 859 | 960 | 8.6e-31 | 105.8 | 2.3e-34 | 8.6e-31 | 105.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_631.1_04412.t1 | gi|676479114|ref|XP_009061643.1| | hypothetical protein LOTGIDRAFT_127397 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_631.1_04412.t1 | gi|586483775|ref|XP_006872392.1| | PREDICTED: nuclear export mediator factor NEMF isoform X1 [Chrysochloris asiatica] | 0.0 |
| pfu_aug2.0_631.1_04412.t1 | gi|512861495|ref|XP_002938173.2| | PREDICTED: nuclear export mediator factor NEMF isoform X1 [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_631.1_04412.t1 | gi|593718814|ref|XP_007105773.1| | PREDICTED: nuclear export mediator factor NEMF isoform X1 [Physeter catodon] | 0.0 |
| pfu_aug2.0_631.1_04412.t1 | gi|602641866|ref|XP_007427730.1| | PREDICTED: nuclear export mediator factor NEMF [Python bivittatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_631.1_04412.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_631.1_04412.t1 atgaagtcaaggtttagtacaatagatatagcagtaggaattaaagaacttgagaggttctatggaatgagagtagtgaa tgtgtatgatatagacaacaaaacctacctcatcaaattgggaagacctgacgacaaggccgtcattttactggagtctg gtatacgtattcacggtacagagtttgactggcccaaacataatgctccatctggattctcaatgaaattaaggaagcat atcaagggaaggcggctagagagtgtttgtcagttaggggctgacagaatcatagacctacagtttggatcaaatgaagc agcataccatgtcattctggaactctatgatagggtaattgcaaattcagctgccaaggaacataccgtcccgtcagagg aacagctgagagaaatcatactaaaagcaaagtcaggagacatgctgaaaaaagtcctccttcctcatctagattatggt ccagccttgacagaccactgtttactgtgtgcaggaatccctgaaaatgtcaaaataggaaaaggatttagctgcactga tgattttgataaactacgatcagctatagagatggcagaggagatgttccatcaagtgagatcacagacgtgtgaggggg tgattgtacagaaaaaggagaagaaagctacgattaaagatggagaatcagaggaattactcacatatgaggagtttcac ccaatgttgttcagacagtttgagggcagaccacattgtgagtttgatacatttaacaaagctgttgatgaattcttttc caaactggagagtcaaaaaatagacatgaaagtactgcagcaggagaaatcagctttgaagaaactggataatataaaga aagatcacgagaaaagaatagaggggctacaggctgaacaagagacagatattaacaaggggagattaatagaactcaat cttcctctggttgataaggctatactaatagtgcgcagtgccctggctaatcagatagactggacagagatagaaaactt ggtaaaggaggcccagatccagggggatccagtggcggccagcataaagtcactcaaactgaacagtaacaccatcactc tgttactcagagatccttacagaaatagtgatgatgagtatgatgatgatgatgaagatgaattaaggccaatgaaaatc gatatcgacctctctctcagtgcttactctaattctcgcaagtacttcgagaagaaaaagcaggcagccaaaaaagaaca gaaaacactagatgcatcagccaaggcactgaaatcagcagagaagaagactcgggagaccctgaaggaagtggctactg ctgcctccataaacaaggccaggaaaacttactggtttgaaaagttcctatggtttattacatcagagaatttcctggtg attggaggtagggaccaacaacagaatgaacttattgtcaagaaatatctcaggccaggtgacctatatgtgcatgctga tttacatggagccagtagctgtgtcatcaaaaacccttcaggggaaccagttcctcccaagactctgaatgaagcaggga ctatggccatttgtaatagtgcagcatgggatgccaaggtggtaacaagtgcatggtgggtataccatgatcaggtgtca aagacagcaccctctggggagtatctgactacaggaagctttatggtcagaggaaagaagaactaccttccaccctcata cttgatatatgggtttggtttactattcaagcttgaggaaggaagcatacctcgtcacaaaggagaaagaaaagtccatg tgactgatgatgacactgtttccatagcaacagaaagtgatatcactgtggataccacaagcgatgttgaaattgaaata gaagatgatagtagtgatgaagataacgacgacaagaaagacaaagaacaactagagacgatagatgagaatagtgaggg cgataatcaaggtcagtcaaggtcacaggacgataaccaaggtcaatcaaggtcacaggagatgaaggaggaagaggagg tggaggaggaaggagctttccctgatacagaactcagtctacaacatgtcaagggagacaatgaattaagaaatactgga gaaaatgttcctagtacagataagggtgaaaataaagccaaactctcagctaagcagagaagagaattgagaaaggcacg taaagctcagaatcagcagtcccagcctgtacaggaggaggaagaggaagacaaggtgtcctggctcagccaacagcagg aagaggaggttcatgataggctgggtggtaaccaggaagaggatcaaaggtcacaacagaccaatcagcaacaacctctc aaacgtggacagagggccaaaatgaagaagatgaaggagaagtacaaacatcaggatgatgaagagagacaacagaggat ggagattctggctgtcaacgtaaacgtgaatcaagatccgaaagaagagtcccagaaacctgttgttaaagaggatgtat tggagtcggatgaggagaaacaagaagaggaagttaaagctgatgatgtacagatgttagattctctgactggctgccct gttgtagaagatgaattactatttgctatcccagtttgtgccccttacaatgcactacataattacaaatacaaagtgaa gcttctacctggatcaacaaaaagaggaaaaggggctaaggcagctttaaacatgtttgtacatgagaaaactttaacca gcagagaaaaggaccttatcaaaatattgaaggatgcggacaccagtcgtaacattcctggcaaggtcaaggtggcagct ccaaatctccataagaagaagggaaagtga |
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Protein
| Protein ID | pfu_aug2.0_631.1_04412.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_631.1_04412.t1 MKSRFSTIDIAVGIKELERFYGMRVVNVYDIDNKTYLIKLGRPDDKAVILLESGIRIHGTEFDWPKHNAPSGFSMKLRKH IKGRRLESVCQLGADRIIDLQFGSNEAAYHVILELYDRVIANSAAKEHTVPSEEQLREIILKAKSGDMLKKVLLPHLDYG PALTDHCLLCAGIPENVKIGKGFSCTDDFDKLRSAIEMAEEMFHQVRSQTCEGVIVQKKEKKATIKDGESEELLTYEEFH PMLFRQFEGRPHCEFDTFNKAVDEFFSKLESQKIDMKVLQQEKSALKKLDNIKKDHEKRIEGLQAEQETDINKGRLIELN LPLVDKAILIVRSALANQIDWTEIENLVKEAQIQGDPVAASIKSLKLNSNTITLLLRDPYRNSDDEYDDDDEDELRPMKI DIDLSLSAYSNSRKYFEKKKQAAKKEQKTLDASAKALKSAEKKTRETLKEVATAASINKARKTYWFEKFLWFITSENFLV IGGRDQQQNELIVKKYLRPGDLYVHADLHGASSCVIKNPSGEPVPPKTLNEAGTMAICNSAAWDAKVVTSAWWVYHDQVS KTAPSGEYLTTGSFMVRGKKNYLPPSYLIYGFGLLFKLEEGSIPRHKGERKVHVTDDDTVSIATESDITVDTTSDVEIEI EDDSSDEDNDDKKDKEQLETIDENSEGDNQGQSRSQDDNQGQSRSQEMKEEEEVEEEGAFPDTELSLQHVKGDNELRNTG ENVPSTDKGENKAKLSAKQRRELRKARKAQNQQSQPVQEEEEEDKVSWLSQQQEEEVHDRLGGNQEEDQRSQQTNQQQPL KRGQRAKMKKMKEKYKHQDDEERQQRMEILAVNVNVNQDPKEESQKPVVKEDVLESDEEKQEEEVKADDVQMLDSLTGCP VVEDELLFAIPVCAPYNALHNYKYKVKLLPGSTKRGKGAKAALNMFVHEKTLTSREKDLIKILKDADTSRNIPGKVKVAA PNLHKKKGK |
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