Gene
| Gene Model ID | pfu_aug2.0_631.1_04414 |
|---|---|
| Locus | scaffold631.1 : 148242 ... 162055 : - |
| To GenomeBrowser | scaffold631.1:148242..162055 |
| Genes list of scaffold | scaffold631.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| hemicentin-1 isoform x2 | GO:0033334 GO:0071711 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_631.1_04414.t1 | 4 | 1 | TSP_1 | 19 | 24 | 6.2e-15 | 55.0 | 2.0 | 15000.0 | -4.7 |
| pfu_aug2.0_631.1_04414.t1 | 4 | 2 | TSP_1 | 61 | 67 | 6.2e-15 | 55.0 | 1.4 | 10000.0 | -3.3 |
| pfu_aug2.0_631.1_04414.t1 | 4 | 3 | TSP_1 | 86 | 136 | 6.2e-15 | 55.0 | 4.1e-12 | 3.0e-08 | 33.6 |
| pfu_aug2.0_631.1_04414.t1 | 4 | 4 | TSP_1 | 143 | 193 | 6.2e-15 | 55.0 | 2.6e-12 | 1.9e-08 | 34.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_631.1_04414.t1 | gi|688602639|ref|XP_009293028.1| | PREDICTED: hemicentin-1 isoform X2 [Danio rerio] | 6.0e-36 |
| pfu_aug2.0_631.1_04414.t1 | gi|512839964|ref|XP_002933812.2| | 8.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_631.1_04414.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_631.1_04414.t1 atgaattgtcaatcacatgacaccatcatacagctgctctcgggaaacctcacgtgtatggagacggaatgttctacagc aaggccttcagttcagtattctgatatgatacagtccaatgatccgccatttgtctccttctcgtgcatgagtggataca ccggaataggaagtgttacgtcatcaacatgtcggccgggagaatcatggtcttcaatcgactacagatgcgagccaccg gttcacggtggttggtctgcttgggggagttatggttcctgtcctgtgacgtgtggtggcggtaccaagtataggagtag gagctgtacaaaccccagccccatgtatggcggtaatgattgtagtgggtccagttcttcagccacctcatgtaacacag actattgcccaattaatggaggctggtcaggctggggatcctggggatcatgtagtaagacttgtgatgggggcactcag cattcatacagatcatgtgacaacccatccccacaatatggcggagcttcctgttccggttcatcttcaagatcacagtc gtgcaatacaaatggatgtcctttttggggaaagagaagacgctga |
|
Protein
| Protein ID | pfu_aug2.0_631.1_04414.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_631.1_04414.t1 MNCQSHDTIIQLLSGNLTCMETECSTARPSVQYSDMIQSNDPPFVSFSCMSGYTGIGSVTSSTCRPGESWSSIDYRCEPP VHGGWSAWGSYGSCPVTCGGGTKYRSRSCTNPSPMYGGNDCSGSSSSATSCNTDYCPINGGWSGWGSWGSCSKTCDGGTQ HSYRSCDNPSPQYGGASCSGSSSRSQSCNTNGCPFWGKRRR |
|