Gene
| Gene Model ID | pfu_aug2.0_631.1_04416 |
|---|---|
| Locus | scaffold631.1 : 175924 ... 184353 : - |
| To GenomeBrowser | scaffold631.1:175924..184353 |
| Genes list of scaffold | scaffold631.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| delta( )-delta( )-dienoyl- mitochondrial | GO:0005739 GO:0008152 GO:0016853 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_631.1_04416.t1 | 2 | 1 | ECH | 15 | 140 | 2.9e-27 | 95.3 | 8.9e-29 | 4.4e-25 | 88.2 |
| pfu_aug2.0_631.1_04416.t1 | 2 | 2 | ECH | 139 | 207 | 2.9e-27 | 95.3 | 0.00068 | 3.4 | 6.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_631.1_04416.t1 | gi|676458911|ref|XP_009055131.1| | hypothetical protein LOTGIDRAFT_232526 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_631.1_04416.t1 | gi|602665438|ref|XP_007438305.1| | PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [Python bivittatus] | 0.0 |
| pfu_aug2.0_631.1_04416.t1 | gi|742212536|ref|XP_010896830.1| | PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial isoform X1 [Esox lucius] | 0.0 |
| pfu_aug2.0_631.1_04416.t1 | gi|742212540|ref|XP_010896831.1| | PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial isoform X2 [Esox lucius] | 0.0 |
| pfu_aug2.0_631.1_04416.t1 | gi|524888758|ref|XP_005100944.1| | PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like isoform X2 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_631.1_04416.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_631.1_04416.t1 atgtcttccagtaactatcagtttgaaaccttaaaagtcacacgaccaaaggagaatgtagtacacgtagaattaaacag accacagaaactaaatgccatgaatcaagcattctggagagaatgtcgtgactgtttcaatcagttatcgcatgatgagg actgcagagttattgttctgtctggatctgggagagtttttacggcgggcttagacttgatggatatggcagacatttca gtgatgcagtcagacatggacgtcgggagaaaggcattccatataaggaagtcattacaggattatcaagaaagttttac cagcatagaaaagtgtactaagcctgtgatagcagcctgccataacgcctgtataggtgggggtatagatatgatatcag catgtgatattagtcgagtatttgcagacaaggattcaatgatggaaggagccctggagacggccagtataatagccagc aaaagtcctgtagctgtacagggatcaaaagtcaacttgatatactccagggatcactctgtgaaagagggactggatta catggtggcatggaatcagggaatgttacaaagtgaagatgttatgaaggctgctatggcaggaatgcagaaaacacaag ccgtcttctctaagttatga |
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Protein
| Protein ID | pfu_aug2.0_631.1_04416.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_631.1_04416.t1 MSSSNYQFETLKVTRPKENVVHVELNRPQKLNAMNQAFWRECRDCFNQLSHDEDCRVIVLSGSGRVFTAGLDLMDMADIS VMQSDMDVGRKAFHIRKSLQDYQESFTSIEKCTKPVIAACHNACIGGGIDMISACDISRVFADKDSMMEGALETASIIAS KSPVAVQGSKVNLIYSRDHSVKEGLDYMVAWNQGMLQSEDVMKAAMAGMQKTQAVFSKL |
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