Gene
| Gene Model ID | pfu_aug2.0_631.1_04417 |
|---|---|
| Locus | scaffold631.1 : 186844 ... 188137 : + |
| To GenomeBrowser | scaffold631.1:186844..188137 |
| Genes list of scaffold | scaffold631.1 |
| Synonym | pfu_aug1.0_16572.1_54320 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| retinol dehydrogenase 14-like | GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_631.1_04417.t1 | 1 | 1 | adh_short | 22 | 164 | 8.9e-22 | 77.7 | 6.3e-25 | 1.3e-21 | 77.2 |
| pfu_aug2.0_631.1_04417.t1 | 1 | 1 | KR | 23 | 127 | 5.8e-09 | 35.8 | 5.8e-12 | 1.2e-08 | 34.8 |
| pfu_aug2.0_631.1_04417.t1 | 1 | 1 | Epimerase | 24 | 204 | 4.2e-09 | 36.2 | 3.2e-12 | 6.8e-09 | 35.5 |
| pfu_aug2.0_631.1_04417.t1 | 1 | 1 | adh_short_C2 | 31 | 213 | 2.0e-08 | 34.3 | 2.8e-11 | 6.0e-08 | 32.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_631.1_04417.t1 | gi|676485303|ref|XP_009063618.1| | hypothetical protein LOTGIDRAFT_154862 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_631.1_04417.t1 | gi|585645662|ref|XP_002730785.2| | PREDICTED: retinol dehydrogenase 14-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_631.1_04417.t1 | gi|260818755|ref|XP_002604548.1| | hypothetical protein BRAFLDRAFT_58779 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_631.1_04417.t1 | gi|390346519|ref|XP_003726570.1| | 0.0 | |
| pfu_aug2.0_631.1_04417.t1 | gi|524880703|ref|XP_005097012.1| | PREDICTED: retinol dehydrogenase 14-like [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_631.1_04417.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_631.1_04417.t1 atgatttatagaaagttgtttacacatacagcaaagtgtttaagtacaaagactttggcaggaaaagtagtgatagtgac cggtgctaacacagggattggcaaggccacatcgcaggagcttgcggagcgtcatgccaaggtgatcatggcttgccgag acatcagcaagggccagtcagctctaaaagacatcaggaaaaatacgaaaaacggaattctagtcgtcaagcagctagac ctgcagtcccaagcctctgttcgccagttttgtagccaaattcttgaagaggagccgcgactggacgttctcattaacaa cgctggtgtgatggggcatccctttactttaactgaggatggagtggagattcatatggccgtaaaccacttcagtaact ttctactcactaatctattgttggatttattgaagaaatcggcacctagcagaattgtgtttgtttcttcatccctgcac aaaagagggaccgtggacttttcaatgtttgacaaaaaacaaaagcatccttatgcaaacagcaagttggctaatattta ctttgctcgtgcactgagtagaaatttagatgggactggagtgcgcgttcatacgttacaccctgggatggtcaatactg agctttcgcgtcattcgttatccagatttatgtgtgttttattatctcctcttgcgtggttcctcttgccgtcatcaaga gagggatgtcagaccgtcgtgtattgtgccgtttcagaggagctggattacgtgacagggcgatattacggaaagtgcaa agaggagccgtggactgaaatcgcgaaaagaaaactcaatgtgtaa |
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Protein
| Protein ID | pfu_aug2.0_631.1_04417.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_631.1_04417.t1 MIYRKLFTHTAKCLSTKTLAGKVVIVTGANTGIGKATSQELAERHAKVIMACRDISKGQSALKDIRKNTKNGILVVKQLD LQSQASVRQFCSQILEEEPRLDVLINNAGVMGHPFTLTEDGVEIHMAVNHFSNFLLTNLLLDLLKKSAPSRIVFVSSSLH KRGTVDFSMFDKKQKHPYANSKLANIYFARALSRNLDGTGVRVHTLHPGMVNTELSRHSLSRFMCVLLSPLAWFLLPSSR EGCQTVVYCAVSEELDYVTGRYYGKCKEEPWTEIAKRKLNV |
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