Gene
| Gene Model ID | pfu_aug2.0_631.1_04419 |
|---|---|
| Locus | scaffold631.1 : 205787 ... 215143 : - |
| To GenomeBrowser | scaffold631.1:205787..215143 |
| Genes list of scaffold | scaffold631.1 |
| Synonym | pfu_aug1.0_34513.1_48159 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| copper chaperone for superoxide dismutase | GO:0006801 GO:0044710 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_631.1_04419.t1 | 1 | 1 | Sod_Cu | 62 | 191 | 3.6e-26 | 92.0 | 7.1e-30 | 5.3e-26 | 91.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_631.1_04419.t1 | gi|260803990|ref|XP_002596872.1| | hypothetical protein BRAFLDRAFT_247007 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_631.1_04419.t1 | gi|524919627|ref|XP_005064096.1| | PREDICTED: copper chaperone for superoxide dismutase [Mesocricetus auratus] | 0.0 |
| pfu_aug2.0_631.1_04419.t1 | gi|723428417|ref|NP_001191151.2| | copper chaperone for superoxide dismutase [Danio rerio] | 0.0 |
| pfu_aug2.0_631.1_04419.t1 | gi|558201698|ref|XP_006131669.1| | PREDICTED: copper chaperone for superoxide dismutase isoform X1 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_631.1_04419.t1 | gi|597800878|ref|XP_007241817.1| | PREDICTED: copper chaperone for superoxide dismutase-like [Astyanax mexicanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_631.1_04419.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_631.1_04419.t1 atgcctgacctcagtgctacaaaagtaggtgtaaaatcagtacaggtgaacttggacacagatcaggtgattgtagagag ctccttaccatccagtaaagtgcagagtctgatagaatccacaggaaagcgggctgtcctacagggttatggaaataacg ccacacagagtttgggggcagcagtagctcagatggaattcggccagcgtgggatcagaggaattatcagacttgttcag accaaccaatcaacatgtgtagtagacggcactgtggacggactgccggcaggaaaacacaagttatatgtacatgaatg tggagatatatccgctgggtgcaatagttgtggtgacgtcttcggattaacagaatcaaagaaggaaaagccactaggag agatcgggaacattgaggcagatagggatggcagatctcagttcagacttacaaacacggacttgaaggtgtgggacatc attggtcgttctatggtcatccatcaaggtcaagatgatacaccgaaaccatacacgccacaaatttacaataggttggt atgtggaattatcgcacgctctgcaggcttgtttcaaaatacaaagaaaatttgtgcatgtgacggtgtcactttgtggg atgagagagacaaaccagtggctggtccaggacggaaatcaaaaatataa |
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Protein
| Protein ID | pfu_aug2.0_631.1_04419.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_631.1_04419.t1 MPDLSATKVGVKSVQVNLDTDQVIVESSLPSSKVQSLIESTGKRAVLQGYGNNATQSLGAAVAQMEFGQRGIRGIIRLVQ TNQSTCVVDGTVDGLPAGKHKLYVHECGDISAGCNSCGDVFGLTESKKEKPLGEIGNIEADRDGRSQFRLTNTDLKVWDI IGRSMVIHQGQDDTPKPYTPQIYNRLVCGIIARSAGLFQNTKKICACDGVTLWDERDKPVAGPGRKSKI |
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