Gene
| Gene Model ID | pfu_aug2.0_631.1_04420 |
|---|---|
| Locus | scaffold631.1 : 221014 ... 233925 : + |
| To GenomeBrowser | scaffold631.1:221014..233925 |
| Genes list of scaffold | scaffold631.1 |
| Synonym | pfu_aug1.0_14469.1_03499 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| g2 m phase-specific e3 ubiquitin-protein ligase | GO:0008152 GO:0009987 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_631.1_04420.t1 | 4 | 1 | zf-HC5HC2H | 15 | 49 | 2.0e-16 | 59.8 | 0.03 | 110.0 | 3.0 |
| pfu_aug2.0_631.1_04420.t1 | 4 | 1 | zf-HC5HC2H_2 | 21 | 59 | 4.2e-07 | 29.9 | 0.026 | 97.0 | 3.0 |
| pfu_aug2.0_631.1_04420.t1 | 4 | 2 | zf-HC5HC2H_2 | 42 | 142 | 4.2e-07 | 29.9 | 1.1e-10 | 4.2e-07 | 29.9 |
| pfu_aug2.0_631.1_04420.t1 | 4 | 1 | zf-RING_2 | 42 | 71 | 3.2e-06 | 26.8 | 0.25 | 910.0 | -0.3 |
| pfu_aug2.0_631.1_04420.t1 | 4 | 2 | zf-HC5HC2H | 67 | 155 | 2.0e-16 | 59.8 | 5.4e-20 | 2.0e-16 | 59.8 |
| pfu_aug2.0_631.1_04420.t1 | 4 | 2 | zf-RING_2 | 108 | 140 | 3.2e-06 | 26.8 | 0.00045 | 1.7 | 8.5 |
| pfu_aug2.0_631.1_04420.t1 | 4 | 3 | zf-HC5HC2H | 173 | 213 | 2.0e-16 | 59.8 | 0.23 | 840.0 | 0.2 |
| pfu_aug2.0_631.1_04420.t1 | 4 | 3 | zf-HC5HC2H_2 | 173 | 213 | 4.2e-07 | 29.9 | 0.65 | 2400.0 | -1.5 |
| pfu_aug2.0_631.1_04420.t1 | 4 | 3 | zf-RING_2 | 175 | 224 | 3.2e-06 | 26.8 | 8.7e-10 | 3.2e-06 | 26.8 |
| pfu_aug2.0_631.1_04420.t1 | 4 | 4 | zf-HC5HC2H_2 | 272 | 301 | 4.2e-07 | 29.9 | 1.6 | 5800.0 | -2.8 |
| pfu_aug2.0_631.1_04420.t1 | 4 | 4 | zf-HC5HC2H | 286 | 305 | 2.0e-16 | 59.8 | 0.089 | 330.0 | 1.5 |
| pfu_aug2.0_631.1_04420.t1 | 4 | 4 | zf-RING_2 | 306 | 322 | 3.2e-06 | 26.8 | 4.0 | 15000.0 | -8.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_631.1_04420.t1 | gi|530619012|ref|XP_005299213.1| | PREDICTED: G2/M phase-specific E3 ubiquitin-protein ligase isoform X1 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_631.1_04420.t1 | gi|260803988|ref|XP_002596871.1| | hypothetical protein BRAFLDRAFT_247017 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_631.1_04420.t1 | gi|591349736|ref|XP_007069410.1| | PREDICTED: G2/M phase-specific E3 ubiquitin-protein ligase [Chelonia mydas] | 0.0 |
| pfu_aug2.0_631.1_04420.t1 | gi|701374147|ref|XP_009992228.1| | PREDICTED: G2/M phase-specific E3 ubiquitin-protein ligase [Chaetura pelagica] | 0.0 |
| pfu_aug2.0_631.1_04420.t1 | gi|698420011|ref|XP_009695299.1| | PREDICTED: G2/M phase-specific E3 ubiquitin-protein ligase-like, partial [Cariama cristata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_631.1_04420.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_631.1_04420.t1 atggatgatacatgtatagcatatgtgaccttcaaaatgcaaaagctgaatatgtcgaagaacagaaaaaaatccaatgc tgttaacaatataaagacattgcttggtgacctgccggaggatcattgtgtattctgtcgtaggaatgatgacaacgagg agtgttatggcaaaaagatacagagtggacttactgtccattacttctgtatgctgttcgctagtggacttagtcagcga ggacagacagatgatcagggaatttatgggttcttaccagaggatataataaaggaaatcaggaggggatccaggctgag atgctcgtattgtaaggagaagggagccactgttgggtgtgttgtgtcaaagtgccggcatgttttccattttggctgtg gtttacaacataataccatgcatcagtacttcgacactttcagttctttctgtggggaacatcgccttgttcagagaata ccgaaagaggaacgatcgcatggcagcgatgatggtagtacagaatgtgctatatgtatgatgactgtagaaatgatacc atcagtagaaactctcaggtcaccttgctgcaggaagacatggttccacagggactgtatcaagagatacgcccttacag caggcttgtacttcttcaaatgtccactgtgtaacaacaaggatcagttccaggcagaaatgctaaagcatggcatctat ataccagatcaagatgcagcatgggagttggaacctaacgcttttaatgaactgttagaacgttacctacactgtgatgc caaggtgtgtaggtgtgaccatgaagacggcagggattataacaaagacggaggacgatgggaaattttggtttgtgact ggtgcggctctaaaggctcccatgtgtcgtgtcacggtctgatcagggtcagtaaggaggattatgtctgccaagattgt atggacatccacaataaatgtaagtctcttcaccaacccacccctctacgtacccgagctcaggcaactagcgcccccta catagagggcagcactgggtctgatagctcctctgtcgattcctctagctcctctcttaatgagggtatgttggaagaat gtgaagatgttactcgtagctcctctcaatcaacaagccctgatgacaggatcatcagaataacacgaaggtctacttgt acaacaacatcaaatacatgtactgacgggagagaggctacacccagtgatatcacagtgtctccagagaggagggactt gagacctcgcaataccacatcagtcagcatggataggatggagtcaaacgataccacgcagcacaggcagttaaggtcta gtgtcaactctccacgtcctgttataccagagtcaaatcagaggtcaaggtcaggtcaagttcaagtcactcgcactgaa atcccggataaacaacaatcaggtacaacacaattgaatagtagacagacaggctccaggacaacaggtcgaagatctac caggaattatagtggacaaaccaaagaaaactgtgatccaggcaaacgtgaatgcaaaggaaaatcttatgtgaatgaac tcaatttgagctatcctaaaccaagcctacgtttaaaacgtgaaatcatgtcactgaatatgtcattcaatgaattatca ttcagccctgtaaaagttcaatcactgaatgaaagtatttgcctaggaagcatcttacttgatggtgataaccgaaggtc aaggtcacaaaccaagcatcaaatggaagagtcacctgccaaaaacctgaggtcaaggtcactgtttaaacaagttctta ctgaatcgcctgcacaaaacttaaggtcaaggtctctgaccaaaagcactaaagtaaagtacaaataa |
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Protein
| Protein ID | pfu_aug2.0_631.1_04420.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_631.1_04420.t1 MDDTCIAYVTFKMQKLNMSKNRKKSNAVNNIKTLLGDLPEDHCVFCRRNDDNEECYGKKIQSGLTVHYFCMLFASGLSQR GQTDDQGIYGFLPEDIIKEIRRGSRLRCSYCKEKGATVGCVVSKCRHVFHFGCGLQHNTMHQYFDTFSSFCGEHRLVQRI PKEERSHGSDDGSTECAICMMTVEMIPSVETLRSPCCRKTWFHRDCIKRYALTAGLYFFKCPLCNNKDQFQAEMLKHGIY IPDQDAAWELEPNAFNELLERYLHCDAKVCRCDHEDGRDYNKDGGRWEILVCDWCGSKGSHVSCHGLIRVSKEDYVCQDC MDIHNKCKSLHQPTPLRTRAQATSAPYIEGSTGSDSSSVDSSSSSLNEGMLEECEDVTRSSSQSTSPDDRIIRITRRSTC TTTSNTCTDGREATPSDITVSPERRDLRPRNTTSVSMDRMESNDTTQHRQLRSSVNSPRPVIPESNQRSRSGQVQVTRTE IPDKQQSGTTQLNSRQTGSRTTGRRSTRNYSGQTKENCDPGKRECKGKSYVNELNLSYPKPSLRLKREIMSLNMSFNELS FSPVKVQSLNESICLGSILLDGDNRRSRSQTKHQMEESPAKNLRSRSLFKQVLTESPAQNLRSRSLTKSTKVKYK |
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