Gene
| Gene Model ID | pfu_aug2.0_631.1_04423 |
|---|---|
| Locus | scaffold631.1 : 256026 ... 267153 : - |
| To GenomeBrowser | scaffold631.1:256026..267153 |
| Genes list of scaffold | scaffold631.1 |
| Synonym | pfu_aug1.0_25408.1_47732 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ap-5 complex subunit mu-1 | GO:0006810 GO:0044444 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_631.1_04423.t1 | 2 | 1 | Adap_comp_sub | 40 | 289 | 9.8e-31 | 106.8 | 6.5e-34 | 9.6e-30 | 103.5 |
| pfu_aug2.0_631.1_04423.t1 | 2 | 2 | Adap_comp_sub | 334 | 358 | 9.8e-31 | 106.8 | 0.011 | 160.0 | 1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_631.1_04423.t1 | gi|291223145|ref|XP_002731573.1| | PREDICTED: AP-5 complex subunit mu-1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_631.1_04423.t1 | gi|260818617|ref|XP_002604479.1| | hypothetical protein BRAFLDRAFT_79220 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_631.1_04423.t1 | gi|754344999|ref|XP_004349404.2| | hypothetical protein CAOG_02654, partial [Capsaspora owczarzaki ATCC 30864] | 0.0 |
| pfu_aug2.0_631.1_04423.t1 | gi|156381336|ref|XP_001632221.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_631.1_04423.t1 | gi|149503805|ref|XP_001516642.1| | PREDICTED: AP-5 complex subunit mu-1 isoform X2 [Ornithorhynchus anatinus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_631.1_04423.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_631.1_04423.t1 atgtacctgtacttgaacatagccgcaccttttggttgtcctttggatgtcaacagtgatacagttacggcaaaaatgta caataaacctagctaccttccaaaaaccaataagcaaccagcatggaaacctgtactatacaaaggcaaaagttctatat acctggccattacagaatatattagagccatccagtacagtagggagaatgtaccggacacatgggacttatatggtact gtatcgtgtaaagctgacctagagggcgctgtaccagatataacgatcaacatctcacacacaccagagggcgcttcact gcccctggaccacctgatgatccatccctgtgtacaaagtgccgactcggctgtcattgacccctcagaagtaaaggcgg caccaagacgagtacgatttactccccctgcagagatgtttgcactttgccactacacagtgtcatctttaaaacaacta ccaattacagctatatatgacatgaagatgtctggtagaatagcgacactgaaggttcagctgaccttgacacagggtat taggaatacgtttgagtactgtgaactacagatgccattttacaatcgaggtacaataaccaaccatgaatctacagcca gtcagggtaatgtaattacgtcacctgataaacgtatactggtatggaatgtaggtctaaaatttcctcccaagtcccat tctgccagcctggaatccacagtgaccttcacagaggtcaaacatactgacctgtatgaggatccattctgcatcaatca aaacgcctacgcacagttatttttcaagataagtgacttcactcagtctggatgttacattgacccaaagtctacccagg tgtcaccaaacaccaagtttaaactcacaacaggtaaaaattatttaggttcaaccgttacaaagtttgaactcacaaca gggttaaaggtcaaaggtaaagatcaccatacatgcaggctgaaaataaccattacgttatttttcaagataagtgactt cactcagtctggatgttacattgacccaaagtctacccaggtgtcaccaaacaccaagtttaaacttacaacagttcagg agtatgtatcagccgagtacaaagtatggaactgtaatggtgacgctttaattagcagtgttcctaagtcactacttact aacgaacatttcccggacaaagactcaggcagctaa |
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Protein
| Protein ID | pfu_aug2.0_631.1_04423.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_631.1_04423.t1 MYLYLNIAAPFGCPLDVNSDTVTAKMYNKPSYLPKTNKQPAWKPVLYKGKSSIYLAITEYIRAIQYSRENVPDTWDLYGT VSCKADLEGAVPDITINISHTPEGASLPLDHLMIHPCVQSADSAVIDPSEVKAAPRRVRFTPPAEMFALCHYTVSSLKQL PITAIYDMKMSGRIATLKVQLTLTQGIRNTFEYCELQMPFYNRGTITNHESTASQGNVITSPDKRILVWNVGLKFPPKSH SASLESTVTFTEVKHTDLYEDPFCINQNAYAQLFFKISDFTQSGCYIDPKSTQVSPNTKFKLTTGKNYLGSTVTKFELTT GLKVKGKDHHTCRLKITITLFFKISDFTQSGCYIDPKSTQVSPNTKFKLTTVQEYVSAEYKVWNCNGDALISSVPKSLLT NEHFPDKDSGS |
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