Gene
| Gene Model ID | pfu_aug2.0_633.1_11016 |
|---|---|
| Locus | scaffold633.1 : 82136 ... 84055 : + |
| To GenomeBrowser | scaffold633.1:82136..84055 |
| Genes list of scaffold | scaffold633.1 |
| Synonym | pfu_aug1.0_82326.1_34939 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_633.1_11016.t1 | 2 | 1 | OATP | 20 | 100 | 6.7e-25 | 87.1 | 5.2e-28 | 7.7e-24 | 83.6 |
| pfu_aug2.0_633.1_11016.t1 | 2 | 2 | OATP | 107 | 153 | 6.7e-25 | 87.1 | 0.0019 | 29.0 | 2.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_633.1_11016.t1 | gi|390348571|ref|XP_001196664.2| | PREDICTED: solute carrier organic anion transporter family member 4A1-like [Strongylocentrotus purpuratus] | 1.0e-25 |
| pfu_aug2.0_633.1_11016.t1 | gi|556751316|ref|XP_005971064.1| | PREDICTED: LOW QUALITY PROTEIN: solute carrier organic anion transporter family member 4A1 [Pantholops hodgsonii] | 6.0e-24 |
| pfu_aug2.0_633.1_11016.t1 | gi|426241171|ref|XP_004014465.1| | 6.0e-24 | |
| pfu_aug2.0_633.1_11016.t1 | gi|390346950|ref|XP_782573.3| | PREDICTED: solute carrier organic anion transporter family member 4A1 [Strongylocentrotus purpuratus] | 8.0e-24 |
| pfu_aug2.0_633.1_11016.t1 | gi|742103966|ref|XP_010834896.1| | PREDICTED: solute carrier organic anion transporter family member 4A1 isoform X2 [Bison bison bison] | 9.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_633.1_11016.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_633.1_11016.t1 atgaatgtaaacgtcttcantccggcaaaaatcttgttagaaaggttgtgggctaaaatcctggtagtggcactatcagt attcaatgtcagtatgtcaattagagtgtgcatgggtatcagatgtgtaccagatgaacatagagctctaggacttggct tacagtgggtcatgctgagattgctaggaacaatacctggaccagtgttaaccggctacgtcattgatcagtcgtgtggt ctgtggcaggacttttgtggtgagcgtggttcttgttgggtctatgataggactcagatgagctggcgcctctttgtgtg gtgggtctgtgtcaaggttttcagtggtgtgctatttctgatctcaagctgcctcgtgaaagaagttgacaatgacgaca aggaactggaaatggaaaaatcaacgaaaaagtctgttgaaaacggtacaacaaagccggatcaagcgggcaccgtgaat gcttcgtataccaatgacgataatcacaaggttgtggtcaacgggaatgaccctggatatgaaagcatgtcaacaaatct atga |
|
Protein
| Protein ID | pfu_aug2.0_633.1_11016.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_633.1_11016.t1 MNVNVFXPAKILLERLWAKILVVALSVFNVSMSIRVCMGIRCVPDEHRALGLGLQWVMLRLLGTIPGPVLTGYVIDQSCG LWQDFCGERGSCWVYDRTQMSWRLFVWWVCVKVFSGVLFLISSCLVKEVDNDDKELEMEKSTKKSVENGTTKPDQAGTVN ASYTNDDNHKVVVNGNDPGYESMSTNL |
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