Gene
| Gene Model ID | pfu_aug2.0_633.1_11018 |
|---|---|
| Locus | scaffold633.1 : 96726 ... 119700 : + |
| To GenomeBrowser | scaffold633.1:96726..119700 |
| Genes list of scaffold | scaffold633.1 |
| Synonym | pfu_aug1.0_6201.1_23976 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_633.1_11018.t1 | 1 | 1 | Fibrinogen_C | 287 | 459 | 1.1e-28 | 100.4 | 3.1e-32 | 2.3e-28 | 99.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_633.1_11018.t1 | gi|558135935|ref|XP_006117444.1| | PREDICTED: ficolin-2-like [Pelodiscus sinensis] | 1.0e-22 |
| pfu_aug2.0_633.1_11018.t1 | gi|594036687|ref|XP_006042996.1| | PREDICTED: LOW QUALITY PROTEIN: ficolin-2-like [Bubalus bubalis] | 9.0e-22 |
| pfu_aug2.0_633.1_11018.t1 | gi|593731059|ref|XP_007111142.1| | PREDICTED: ficolin-2 isoform X1 [Physeter catodon] | 3.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_633.1_11018.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_633.1_11018.t1 atgggagaatctttgacaaataaattgataaccaaagtaattgaaacatcgtttgtttcctgccttcatgaatgtgctaa gagaccgagatgtacttctataaactataggagacagtttttattatgtgaacttaatcaggaagtaaccgatggcattg ccgtctatgaggctgaaacatctatcttcacgctaatcaatccgtggatttcaagtttagacagctcgtgcagcaaagga tcttccatcggcgataatctgaaaatggaatgtattttcgatgaatttgaaaccccacaaaaacgtatttcagattgtgg tgcccctccttggaaatggaaagcactgtacgatgtacaaaacggtattggcatattttcgagagctacatacttttgtg agaacggttatgggggtactggactttcaacagtatcatgtatggaggatagcgcttggtcggatcaaggattccagtgt attaaagtttgtagtcaaggatatgagccagctggatacttctgctccgaatgtcaggctggcacctactctccatcaac tggtatcagcgattgcttgtattgcccttcagaccagtaccatgacttcaggggacaggaatcatgtatgaattgtacaa taaatgacaatccttgtggaaatgtctacactataccagataccaacgtaatagtggaaccaagtgatgacaggacagaa tgcagggcaatttacttctgcagaacctcatcagggatatctatagaatcgcaaaatgtttatgtcatctgtcacagaga tggttctagtggatcatataccttccattggacacgacctagtttacactgcatttcagattgcgaacatttacagctta ctcaaacatcgtacgaggggcaaattgtagaaatcaatagcagaactggtggaacgttttactgtgatactagctatgac ggagattattggacggtccttcaacaacgatcaagtgcacgtggaacttacgcgtttgacaaaacttggtcagagttcaa gaatggcttcggatcgatccacagtgatttttggataggcaatgataatctgcacagactgaccagcattgggagttatg aggtactgattttgttgtgggtcggagacggtaactacacccgtcaggaaactgctagatatagagatttcgaagttaaa gatgagcatgagaattataaactagaaatagaccaattcgacgatggaaaaagcgacgcagatgatttcatgacagaaaa agatggatggtcattttctacgaaagacaataaagaaaccggattgccatgttcgcaggaacaagattctggatggtggc ataaaacgtataaaattgtatttatcaagcattgcactacacgtggaaatgtgaatgcattaaaatggaaaaattactat gacaaaacaagagtgcttataaaaccaacttga |
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Protein
| Protein ID | pfu_aug2.0_633.1_11018.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_633.1_11018.t1 MGESLTNKLITKVIETSFVSCLHECAKRPRCTSINYRRQFLLCELNQEVTDGIAVYEAETSIFTLINPWISSLDSSCSKG SSIGDNLKMECIFDEFETPQKRISDCGAPPWKWKALYDVQNGIGIFSRATYFCENGYGGTGLSTVSCMEDSAWSDQGFQC IKVCSQGYEPAGYFCSECQAGTYSPSTGISDCLYCPSDQYHDFRGQESCMNCTINDNPCGNVYTIPDTNVIVEPSDDRTE CRAIYFCRTSSGISIESQNVYVICHRDGSSGSYTFHWTRPSLHCISDCEHLQLTQTSYEGQIVEINSRTGGTFYCDTSYD GDYWTVLQQRSSARGTYAFDKTWSEFKNGFGSIHSDFWIGNDNLHRLTSIGSYEVLILLWVGDGNYTRQETARYRDFEVK DEHENYKLEIDQFDDGKSDADDFMTEKDGWSFSTKDNKETGLPCSQEQDSGWWHKTYKIVFIKHCTTRGNVNALKWKNYY DKTRVLIKPT |
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