Gene
| Gene Model ID | pfu_aug2.0_634.1_14408 |
|---|---|
| Locus | scaffold634.1 : 168076 ... 170210 : + |
| To GenomeBrowser | scaffold634.1:168076..170210 |
| Genes list of scaffold | scaffold634.1 |
| Synonym | pfu_aug1.0_657.1_58182 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_634.1_14408.t1 | 1 | 1 | RVT_1 | 237 | 362 | 4.5e-13 | 49.0 | 5.3e-16 | 1.3e-12 | 47.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_634.1_14408.t1 | gi|512839867|ref|XP_004914327.1| | PREDICTED: uncharacterized protein K02A2.6-like [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_634.1_14408.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_634.1_14408.t1 atgaaaggtagtaaaacgcatcatctaaatgggtattgtgatgacgacagtgatgacagcctccttggatgcttggaaat tcatcatgtaaatgggaaagttctcaaaatggagttagatacagggtctgcatccactgtaatgaatgagcagcagttcc ggaatcattttggtaatgcgaagtggaataaaactgacaccacattccgtacctattcgaaagaagttctgaaaccccta ggtttgattaatgtggatgtcaaggtcaaagacgtaactaagactctaccactgtatattgtcaaaactggaggaccacc gctattcggatgtgattggatacacgaactttactgtgcagattggattcagagcttcatgattcagcacatacagccca ttaatgccttacatgttcctatgaataaggaaagttgcaagaaaatcacacaggatttaatcgcacagtacaaggatgtt ttcagcgaagagcttggaactgtgaaggtaattaaggcgaaattcaaattcaaaccggaaaccacacctcggttgtgcgt tctcactcaagttaaccatagtgaatgggcaactcccatagttgtcgtcccgaaaaaggacaaatccgttcgtatttgtg gcgacttcaaagtcagcataaatccgtttctggacattgaccagtacccccttccaaaagtcgatgatatattcgcaaac ctagagggaggtaaacatttcacaaagcttgatttaaagaatgcatacctacagatggaagtagaagagggagaccggaa gtacctaacgattaacactcaccgtggactttttcagtttaacaggatgatttatggaatcgcatcagcgcctgctactt ggcaaagaaccatgggtcagattttgcaagggctaccgagtgtacagtgcatgatcgacgatatgatcataacaggaagc actgatgcagaacacctgcaaaatcttgaagtagtacttaaacgcttacaaatgtatggtctcaaggccaataccgagaa atgcaatattttcaaggaaagcgtggaattctgcggtcatgaaatccgagcagatggacttcatatgactgaaaataaag taaaagctgtcgtagatgcaaagacacctgaaaacgtcacagagttacgagctttcttaggactccttccgaatttgtca acggaacttaggccattgcataagttactggaaaaggatcgcaaatggacctggactccgcaatgtcagaaagcgtttca acgtgtcaaggaactcattaaatctgacaaagtgttggtaaactacaaccctacacttccacttcgtttatcatgtgacg catcaccatttggacttggtgccgtcttatcacatgtgtatcaatcgggagaggagagaccgattgcatttgcgtcaaga accttaaatgcagcagagcaaaattactcgcagattgataaagaggcccttgccattgtatggggaattaagagattcga aacatatctcttctgcagacattttcccctcgttactgatcatcagcctcttgttgctataatcaatccaaagaaggcta tacctatgacaacagctgcacgtttgcagaaatacgctctcttcttatctggacttgactactctatcgagtacaggagc actaaacaacacggcaatgccgatggactctctaggctccctcttcccgcaaaatcaaaagaagccgatgatcatatgat gcttcacacatatttcaactgtctcaactcgtttgcttacctgtaa |
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Protein
| Protein ID | pfu_aug2.0_634.1_14408.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_634.1_14408.t1 MKGSKTHHLNGYCDDDSDDSLLGCLEIHHVNGKVLKMELDTGSASTVMNEQQFRNHFGNAKWNKTDTTFRTYSKEVLKPL GLINVDVKVKDVTKTLPLYIVKTGGPPLFGCDWIHELYCADWIQSFMIQHIQPINALHVPMNKESCKKITQDLIAQYKDV FSEELGTVKVIKAKFKFKPETTPRLCVLTQVNHSEWATPIVVVPKKDKSVRICGDFKVSINPFLDIDQYPLPKVDDIFAN LEGGKHFTKLDLKNAYLQMEVEEGDRKYLTINTHRGLFQFNRMIYGIASAPATWQRTMGQILQGLPSVQCMIDDMIITGS TDAEHLQNLEVVLKRLQMYGLKANTEKCNIFKESVEFCGHEIRADGLHMTENKVKAVVDAKTPENVTELRAFLGLLPNLS TELRPLHKLLEKDRKWTWTPQCQKAFQRVKELIKSDKVLVNYNPTLPLRLSCDASPFGLGAVLSHVYQSGEERPIAFASR TLNAAEQNYSQIDKEALAIVWGIKRFETYLFCRHFPLVTDHQPLVAIINPKKAIPMTTAARLQKYALFLSGLDYSIEYRS TKQHGNADGLSRLPLPAKSKEADDHMMLHTYFNCLNSFAYL |
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