Gene
| Gene Model ID | pfu_aug2.0_634.1_14411 |
|---|---|
| Locus | scaffold634.1 : 208921 ... 216858 : + |
| To GenomeBrowser | scaffold634.1:208921..216858 |
| Genes list of scaffold | scaffold634.1 |
| Synonym | pfu_aug1.0_657.1_58177 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 43 kda receptor-associated protein of the synapse-like isoform x1 | GO:0005102 GO:0005737 GO:0005856 GO:0005886 GO:0007268 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_634.1_14411.t1 | 3 | 1 | Rapsyn_N | 1 | 68 | 3.4e-12 | 45.9 | 2.6e-14 | 1.7e-11 | 43.7 |
| pfu_aug2.0_634.1_14411.t1 | 5 | 1 | TPR_11 | 2 | 58 | 4.9e-14 | 51.7 | 0.00018 | 0.11 | 12.1 |
| pfu_aug2.0_634.1_14411.t1 | 6 | 1 | TPR_2 | 3 | 22 | 2.0e-13 | 49.1 | 0.13 | 85.0 | 3.4 |
| pfu_aug2.0_634.1_14411.t1 | 5 | 1 | TPR_12 | 4 | 57 | 1.1e-16 | 60.5 | 0.046 | 30.0 | 4.6 |
| pfu_aug2.0_634.1_14411.t1 | 6 | 2 | TPR_2 | 36 | 53 | 2.0e-13 | 49.1 | 0.81 | 520.0 | 0.9 |
| pfu_aug2.0_634.1_14411.t1 | 6 | 1 | TPR_1 | 36 | 55 | 1.2e-11 | 43.6 | 0.25 | 160.0 | 2.1 |
| pfu_aug2.0_634.1_14411.t1 | 5 | 1 | TPR_7 | 41 | 61 | 1.1e-11 | 43.6 | 0.87 | 560.0 | 0.7 |
| pfu_aug2.0_634.1_14411.t1 | 5 | 2 | TPR_11 | 42 | 101 | 4.9e-14 | 51.7 | 3.5e-05 | 0.023 | 14.3 |
| pfu_aug2.0_634.1_14411.t1 | 6 | 1 | TPR_8 | 42 | 49 | 2.3e-11 | 42.6 | 6.7 | 4300.0 | -2.1 |
| pfu_aug2.0_634.1_14411.t1 | 6 | 3 | TPR_2 | 74 | 101 | 2.0e-13 | 49.1 | 0.00025 | 0.16 | 11.9 |
| pfu_aug2.0_634.1_14411.t1 | 6 | 2 | TPR_1 | 75 | 102 | 1.2e-11 | 43.6 | 0.0007 | 0.45 | 10.2 |
| pfu_aug2.0_634.1_14411.t1 | 6 | 2 | TPR_8 | 76 | 102 | 2.3e-11 | 42.6 | 0.00098 | 0.63 | 9.9 |
| pfu_aug2.0_634.1_14411.t1 | 5 | 2 | TPR_12 | 77 | 102 | 1.1e-16 | 60.5 | 0.014 | 9.3 | 6.2 |
| pfu_aug2.0_634.1_14411.t1 | 5 | 2 | TPR_7 | 77 | 102 | 1.1e-11 | 43.6 | 7.0e-05 | 0.045 | 13.5 |
| pfu_aug2.0_634.1_14411.t1 | 6 | 4 | TPR_2 | 121 | 144 | 2.0e-13 | 49.1 | 0.00011 | 0.071 | 13.0 |
| pfu_aug2.0_634.1_14411.t1 | 6 | 3 | TPR_1 | 121 | 143 | 1.2e-11 | 43.6 | 9.5e-05 | 0.062 | 12.9 |
| pfu_aug2.0_634.1_14411.t1 | 5 | 3 | TPR_12 | 122 | 189 | 1.1e-16 | 60.5 | 1.5e-09 | 9.4e-07 | 28.6 |
| pfu_aug2.0_634.1_14411.t1 | 5 | 3 | TPR_11 | 122 | 187 | 4.9e-14 | 51.7 | 7.5e-07 | 0.00048 | 19.7 |
| pfu_aug2.0_634.1_14411.t1 | 5 | 3 | TPR_7 | 122 | 148 | 1.1e-11 | 43.6 | 0.0027 | 1.7 | 8.6 |
| pfu_aug2.0_634.1_14411.t1 | 6 | 3 | TPR_8 | 122 | 143 | 2.3e-11 | 42.6 | 0.0002 | 0.13 | 12.1 |
| pfu_aug2.0_634.1_14411.t1 | 5 | 4 | TPR_11 | 159 | 228 | 4.9e-14 | 51.7 | 1.7e-05 | 0.011 | 15.3 |
| pfu_aug2.0_634.1_14411.t1 | 6 | 5 | TPR_2 | 160 | 189 | 2.0e-13 | 49.1 | 0.00079 | 0.51 | 10.3 |
| pfu_aug2.0_634.1_14411.t1 | 6 | 4 | TPR_8 | 160 | 187 | 2.3e-11 | 42.6 | 9.8e-06 | 0.0063 | 16.2 |
| pfu_aug2.0_634.1_14411.t1 | 6 | 4 | TPR_1 | 161 | 187 | 1.2e-11 | 43.6 | 8.6e-05 | 0.055 | 13.0 |
| pfu_aug2.0_634.1_14411.t1 | 5 | 4 | TPR_7 | 163 | 187 | 1.1e-11 | 43.6 | 0.00017 | 0.11 | 12.3 |
| pfu_aug2.0_634.1_14411.t1 | 5 | 4 | TPR_12 | 206 | 268 | 1.1e-16 | 60.5 | 2.6e-05 | 0.017 | 15.0 |
| pfu_aug2.0_634.1_14411.t1 | 5 | 5 | TPR_11 | 206 | 265 | 4.9e-14 | 51.7 | 0.0094 | 6.1 | 6.5 |
| pfu_aug2.0_634.1_14411.t1 | 3 | 2 | Rapsyn_N | 206 | 236 | 3.4e-12 | 45.9 | 6.1 | 4000.0 | -2.3 |
| pfu_aug2.0_634.1_14411.t1 | 6 | 5 | TPR_1 | 212 | 224 | 1.2e-11 | 43.6 | 6.5 | 4200.0 | -2.4 |
| pfu_aug2.0_634.1_14411.t1 | 6 | 6 | TPR_2 | 242 | 257 | 2.0e-13 | 49.1 | 1.1 | 720.0 | 0.5 |
| pfu_aug2.0_634.1_14411.t1 | 5 | 5 | TPR_7 | 247 | 259 | 1.1e-11 | 43.6 | 0.99 | 640.0 | 0.5 |
| pfu_aug2.0_634.1_14411.t1 | 6 | 5 | TPR_8 | 247 | 271 | 2.3e-11 | 42.6 | 2.1 | 1300.0 | -0.5 |
| pfu_aug2.0_634.1_14411.t1 | 6 | 6 | TPR_1 | 248 | 257 | 1.2e-11 | 43.6 | 4.3 | 2800.0 | -1.8 |
| pfu_aug2.0_634.1_14411.t1 | 3 | 3 | Rapsyn_N | 279 | 293 | 3.4e-12 | 45.9 | 8.6 | 5600.0 | -2.8 |
| pfu_aug2.0_634.1_14411.t1 | 5 | 5 | TPR_12 | 287 | 296 | 1.1e-16 | 60.5 | 9.2 | 5900.0 | -2.8 |
| pfu_aug2.0_634.1_14411.t1 | 6 | 6 | TPR_8 | 287 | 297 | 2.3e-11 | 42.6 | 2.5 | 1600.0 | -0.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_634.1_14411.t1 | gi|688596648|ref|XP_009291814.1| | PREDICTED: 43 kDa receptor-associated protein of the synapse isoform X1 [Danio rerio] | 0.0 |
| pfu_aug2.0_634.1_14411.t1 | gi|530395609|ref|XP_005253100.1| | PREDICTED: 43 kDa receptor-associated protein of the synapse isoform X4 [Homo sapiens] | 0.0 |
| pfu_aug2.0_634.1_14411.t1 | gi|694944441|ref|XP_009458637.1| | PREDICTED: 43 kDa receptor-associated protein of the synapse isoform X3 [Pan troglodytes] | 0.0 |
| pfu_aug2.0_634.1_14411.t1 | gi|551510959|ref|XP_005807000.1| | PREDICTED: 43 kDa receptor-associated protein of the synapse-like isoform X1 [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_634.1_14411.t1 | gi|556948280|ref|XP_005987009.1| | PREDICTED: 43 kDa receptor-associated protein of the synapse isoform X3 [Latimeria chalumnae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_634.1_14411.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_634.1_14411.t1 atgaaactttatcaagaagaaaactttgccggcgcaataagtgaatggagtaatgctttaaaacgaagtagtaagtctgg tagagtggaggataaatttaatattctgggatatctttgttctgtgtattttgatacagggaaatatagggacgtgatat tgtgtgctaaccaacaagcggagatatgtcacaaggtcaacgacagatatatgaagcaagagggattcttcaatcttgcg aggggatatgagcgactcgcaaacttcgagaaaagcatcacatactgtggaaaatgtatagaagtagggaacaaaaagaa accggaaaactgtatcgatttagaaatattttcattcgtctgtctcgggaaggcgtacttcggattgagcgattttcata attctttaaaacatttcgaagaagcgctgattaaaagtgagaaagagaaagaaaataatatctgcataaaattcttggtg tatgaaagtctaggtatattatttgacaaactaaatgattatgagacctctctatcatatctagaacgatgtctggatat agttcaaaccaacattgaggaattgtctaagtataagagaaggatccaagtagatctggctttacctctattacattccg ggaggttgaacgatgccatggacatgtgcgagctttccatgaaggaggcaatgcgtgttggagaccgtccagttcaggga aaatgcttgtttacattcgcggaaattcacaggaaacggaaagactatgaggccctagaactaagtgagaaggcggcggg tctcgcattagatataggaaataagtttggttatctggagagtaagaccagaatggtggacctttatagaatgctgggta atgacgagagttcacggttcagtgatgctgaggtcactaccgtggccaatgaactggaactgttctgtggagtgtgtgga gaacaaataggattgatacctgaaggtctggatccactaccttgtggtcatctgattcactcaaggtgtgtgccgcatct agcccgctacacgtggggtaggaaagggcgtcgtcgtccctgtccttcatgtcgggcacgttcctcgggaaaccctctgt cagacagggcatag |
|
Protein
| Protein ID | pfu_aug2.0_634.1_14411.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_634.1_14411.t1 MKLYQEENFAGAISEWSNALKRSSKSGRVEDKFNILGYLCSVYFDTGKYRDVILCANQQAEICHKVNDRYMKQEGFFNLA RGYERLANFEKSITYCGKCIEVGNKKKPENCIDLEIFSFVCLGKAYFGLSDFHNSLKHFEEALIKSEKEKENNICIKFLV YESLGILFDKLNDYETSLSYLERCLDIVQTNIEELSKYKRRIQVDLALPLLHSGRLNDAMDMCELSMKEAMRVGDRPVQG KCLFTFAEIHRKRKDYEALELSEKAAGLALDIGNKFGYLESKTRMVDLYRMLGNDESSRFSDAEVTTVANELELFCGVCG EQIGLIPEGLDPLPCGHLIHSRCVPHLARYTWGRKGRRRPCPSCRARSSGNPLSDRA |
|