Gene
| Gene Model ID | pfu_aug2.0_635.1_17662 |
|---|---|
| Locus | scaffold635.1 : 3286 ... 19242 : + |
| To GenomeBrowser | scaffold635.1:3286..19242 |
| Genes list of scaffold | scaffold635.1 |
| Synonym | pfu_aug1.0_17338.1_69079 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| condensin complex subunit 2-like | GO:0007067 GO:0043229 GO:0051276 GO:0090304 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_635.1_17662.t1 | 1 | 1 | Cnd2 | 36 | 701 | 0.0 | 472.3 | 0.0 | 0.0 | 467.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_635.1_17662.t1 | gi|676450278|ref|XP_009052327.1| | hypothetical protein LOTGIDRAFT_231660 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_635.1_17662.t1 | gi|524868565|ref|XP_005091084.1| | PREDICTED: condensin complex subunit 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_635.1_17662.t1 | gi|585718835|ref|XP_006825955.1| | PREDICTED: condensin complex subunit 2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_635.1_17662.t1 | gi|260786151|ref|XP_002588122.1| | hypothetical protein BRAFLDRAFT_124950 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_635.1_17662.t1 | gi|196013871|ref|XP_002116796.1| | hypothetical protein TRIADDRAFT_60794 [Trichoplax adhaerens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_635.1_17662.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_635.1_17662.t1 atgccatcccacagggaggttttatctcccttgaccacacctaacataccgcagcattccctcagtagtcgttttatctc tccgtcaaccagtcgtcatgtcagtcttaagtcccccgtccccatgttaaccgcagagcatgatgatgcggccgagaaac gggaacgccgtcgatctcggattatccaacttcaacaaagtgcagctagtcccctatcaccaacagataaacgcagatcc ttgcctctcagtggattatcagccaatcagctcgcagaacactattctagttgtatcaaactttcagccgaaaataaaat caacgccaagaatgcatttggactgcatctcatcgattatatgtcagatttggtcaagaaaaaagagcttgataatttcc aggttgcgagcacaactctcgacgctagtgccaaaatctacgctggcagagtggacgccatacatgctgagacatataag gtattgacaggactgggacgggagaaagataaaactaaagaggacgatgaaggtaaaaccaagaagaaccataccataga gtcgaatttgaaaaacatcagtgtcaataaaatagatctggaatttgaggtggatcctctgttccaaatgatgtcggcag catttgatgaaggtggtagcagcggccttctattaaacaatttacggtgttttgacgaccaacaagagctggtgttagac tcatcatcctctactgaccccgcctacctgcaccccgagggattcagtcaacctcagcctatagaactggctgaaataaa aactgatgttttatctggtaaatgtcaagataacaagacttcaattcttccctccgcatcccagagttccacgtcagcac atgtatttgacatgaacgctgaaccagagccgattatagaggcagatggtgatatggacgatgtaccatttaactcagat tttcctggtgacggaatgtcagatcatgaaggaaatgcagatggtgatgatggtgagagtagagacgatgggcattccac agataaatctatgtttataggggacggtaaagcagctcaactcatgcagagtgccatcagagatctcacacatggaacaa cagggacgttactgagtgtattagcttcagaaccctcagactattcttacttcaataaaagtttactgagaacatgggcg ggaccatctcactggagactggctccattatcaaaagatccaagattcaagggcattgtagacaaatcacagaaagcaaa gaaacctgtgttcaaaatcgactacgatgcggaaaaagaattcaccaactaccttaaaccttccaaggccactaccctca ccactgccaccctcacgaagtacagtaaagataaaaataccttacccaaagatctccactacgacgccgataaattattc cgactattttgtaaatctaaattgatgattaaaagacaggatacttcctcatccaatatcgttgatgacgacattgaaaa ctatgattatgagaataccaacgatcgagaaaatttctgtccgaaagaaggcgtagagatggataatgatgatgatggcg gtgactttgattttaactttacacaagccggagagaactgtagtcaggaatctaacgattttactcaggctgatgcaacc atgaataatactatactaggtgataaactcgtcagccagccgaacaaggttgcaaagatcgacatagattatgctaaaac ggccaagaagttggatgtaaagaaactgaagggcgtcatatggaatcttctaacatcaaaacagaagacggctgacacgg ataaaacgacagaaaggatggaggaagggggaggggataatcaacagaaaccggaggtcactgccggtactagtaatgac aaggagatgggggctgaatgctcatttcaggaaatccttacccaactacctcaaaacgtgtccaatcaaatggctcgtaa cataagcactcctatagcctttgtatgcctgctacatttagctaatgaaaagtgtttaaagatagagagtgacaacatga ctgatctcaagatttctcaggatcattattag |
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Protein
| Protein ID | pfu_aug2.0_635.1_17662.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_635.1_17662.t1 MPSHREVLSPLTTPNIPQHSLSSRFISPSTSRHVSLKSPVPMLTAEHDDAAEKRERRRSRIIQLQQSAASPLSPTDKRRS LPLSGLSANQLAEHYSSCIKLSAENKINAKNAFGLHLIDYMSDLVKKKELDNFQVASTTLDASAKIYAGRVDAIHAETYK VLTGLGREKDKTKEDDEGKTKKNHTIESNLKNISVNKIDLEFEVDPLFQMMSAAFDEGGSSGLLLNNLRCFDDQQELVLD SSSSTDPAYLHPEGFSQPQPIELAEIKTDVLSGKCQDNKTSILPSASQSSTSAHVFDMNAEPEPIIEADGDMDDVPFNSD FPGDGMSDHEGNADGDDGESRDDGHSTDKSMFIGDGKAAQLMQSAIRDLTHGTTGTLLSVLASEPSDYSYFNKSLLRTWA GPSHWRLAPLSKDPRFKGIVDKSQKAKKPVFKIDYDAEKEFTNYLKPSKATTLTTATLTKYSKDKNTLPKDLHYDADKLF RLFCKSKLMIKRQDTSSSNIVDDDIENYDYENTNDRENFCPKEGVEMDNDDDGGDFDFNFTQAGENCSQESNDFTQADAT MNNTILGDKLVSQPNKVAKIDIDYAKTAKKLDVKKLKGVIWNLLTSKQKTADTDKTTERMEEGGGDNQQKPEVTAGTSND KEMGAECSFQEILTQLPQNVSNQMARNISTPIAFVCLLHLANEKCLKIESDNMTDLKISQDHY |
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