Gene
| Gene Model ID | pfu_aug2.0_635.1_17667 |
|---|---|
| Locus | scaffold635.1 : 80096 ... 92317 : + |
| To GenomeBrowser | scaffold635.1:80096..92317 |
| Genes list of scaffold | scaffold635.1 |
| Synonym | pfu_aug1.0_55233.1_27370 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_635.1_17667.t1 | 1 | 1 | Orn_Arg_deC_N | 45 | 282 | 0.0 | 273.3 | 0.0 | 0.0 | 272.9 |
| pfu_aug2.0_635.1_17667.t1 | 1 | 1 | AP_endonuc_2 | 166 | 276 | 4.8e-06 | 26.0 | 2.1e-09 | 7.8e-06 | 25.3 |
| pfu_aug2.0_635.1_17667.t1 | 1 | 1 | Orn_DAP_Arg_deC | 286 | 410 | 1.1e-30 | 105.7 | 5.5e-34 | 2.0e-30 | 104.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_635.1_17667.t1 | gi|524877104|ref|XP_005095259.1| | PREDICTED: ornithine decarboxylase-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_635.1_17667.t1 | gi|676457769|ref|XP_009054759.1| | hypothetical protein LOTGIDRAFT_178433 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_635.1_17667.t1 | gi|259013291|ref|NP_001158445.1| | ornithine decarboxylase 1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_635.1_17667.t1 | gi|156392831|ref|XP_001636251.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_635.1_17667.t1 | gi|675847172|ref|XP_009009146.1| | hypothetical protein HELRODRAFT_93271 [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_635.1_17667.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_635.1_17667.t1 atgaagcattattacggaaaaaattgtgttgttgaattgaataaatctgacaagtccatcgcagctgtagtgcaagagaa gataactcttcacgaaggggagcagcgagacgaagcatttatcgtaggggacctaggcgatatcattaaaaagtatgaaa gatggaatgctgctctacccagggtccgacccttctacgccgtaaaatgtaacgatgatcatgccgtgctgaagctcctg gttgacatgggtctatcctttgattgtgcaagcaagggagagatagagaaggtactagccctaggggtggatccagaaag gattgtgtatgctaatccctgtaagcagacctccttcatcaagtatgctgccaagaaacatgtctccatgatgacctttg acaatgaagatgaactccataagatcaaagcattctacccagatgctcagcttatcttgagaatcttgccacagtcaaac ttcaaagtccagtgtgagcttgggaacaaatttggatgtaaccccaagaaagctcgatatctgttagaggcagccaaaga tctaggactcaatgttatgggcattagctttcacgtgggcagcggctgtgaagaagctgaagcatttgctgtggctgtac agcaggccagagacgccttcgatgcggccctccaacttggctttgacatgaccatgctcgacattggaggtggattccct ggacagtcttctgctccaatctcatttgaagagatagcgttggtgctgaatgaagcccttgacagatattttcctgacac taacgtggacattatagcggaacctggacgctactttgtggcctcagccttcacactaggtgttaacatcattgccaaga gaatcgtggctagggaccaacatggagataatgatgagcctttggactatcccacagccaatgatgagccagtgatgatg tactatgtcaatgacggagtctacggatcatttaattgtctcctgtacgaccacgccacggtccaagtatctgttccaga tgattctgacggagatgttacatacaccagcagtatctggggaccaacatgtgacggcttggattgtatcctggagaaca cgagtctgccagagttacgtgtcgggaactggttgtacttcaaggacatgggagcatacacaatgtcagctgcctctact ttcaatggaatgcctccaccaagacgcttctacaactgcagcttagagacctggcatacagtgtacccagagctcagcca taaacagcgttacattgacagtatcccccacatgaaggcagggcgccacctggaggaaaccccagacatcctggctacgt cccctactgatgctttcctcttctttggtacatctccaaaggatgcacacctaggattagcatatggcgtggagaattga |
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Protein
| Protein ID | pfu_aug2.0_635.1_17667.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_635.1_17667.t1 MKHYYGKNCVVELNKSDKSIAAVVQEKITLHEGEQRDEAFIVGDLGDIIKKYERWNAALPRVRPFYAVKCNDDHAVLKLL VDMGLSFDCASKGEIEKVLALGVDPERIVYANPCKQTSFIKYAAKKHVSMMTFDNEDELHKIKAFYPDAQLILRILPQSN FKVQCELGNKFGCNPKKARYLLEAAKDLGLNVMGISFHVGSGCEEAEAFAVAVQQARDAFDAALQLGFDMTMLDIGGGFP GQSSAPISFEEIALVLNEALDRYFPDTNVDIIAEPGRYFVASAFTLGVNIIAKRIVARDQHGDNDEPLDYPTANDEPVMM YYVNDGVYGSFNCLLYDHATVQVSVPDDSDGDVTYTSSIWGPTCDGLDCILENTSLPELRVGNWLYFKDMGAYTMSAAST FNGMPPPRRFYNCSLETWHTVYPELSHKQRYIDSIPHMKAGRHLEETPDILATSPTDAFLFFGTSPKDAHLGLAYGVEN |
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