Gene
| Gene Model ID | pfu_aug2.0_635.1_17668 |
|---|---|
| Locus | scaffold635.1 : 98369 ... 109685 : - |
| To GenomeBrowser | scaffold635.1:98369..109685 |
| Genes list of scaffold | scaffold635.1 |
| Synonym | pfu_aug1.0_27750.1_69849 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tyrosine kinase | GO:0002252 GO:0002429 GO:0004713 GO:0005515 GO:0005764 GO:0005884 GO:0005901 GO:0005925 GO:0006887 GO:0008284 GO:0008360 GO:0009611 GO:0018108 GO:0031234 GO:0031347 GO:0043066 GO:0045087 GO:0046777 GO:0048731 GO:0050764 GO:0051090 GO:0051707 GO:0071310 GO:0071801 GO:0090022 GO:2000251 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_635.1_17668.t1 | 2 | 1 | zf-B_box | 20 | 52 | 2.4e-11 | 43.3 | 3.8e-08 | 8.2e-05 | 22.4 |
| pfu_aug2.0_635.1_17668.t1 | 2 | 2 | zf-B_box | 68 | 104 | 2.4e-11 | 43.3 | 2.3e-09 | 4.9e-06 | 26.3 |
| pfu_aug2.0_635.1_17668.t1 | 3 | 1 | Pkinase | 141 | 169 | 1.2e-19 | 70.4 | 0.99 | 2100.0 | -2.4 |
| pfu_aug2.0_635.1_17668.t1 | 3 | 1 | Pkinase_Tyr | 197 | 231 | 0.0 | 167.6 | 0.083 | 180.0 | 1.0 |
| pfu_aug2.0_635.1_17668.t1 | 3 | 2 | Pkinase_Tyr | 293 | 440 | 0.0 | 167.6 | 2.0e-33 | 4.3e-30 | 104.6 |
| pfu_aug2.0_635.1_17668.t1 | 3 | 2 | Pkinase | 298 | 440 | 1.2e-19 | 70.4 | 5.7e-21 | 1.2e-17 | 63.9 |
| pfu_aug2.0_635.1_17668.t1 | 3 | 3 | Pkinase_Tyr | 453 | 517 | 0.0 | 167.6 | 4.2e-20 | 8.9e-17 | 61.0 |
| pfu_aug2.0_635.1_17668.t1 | 3 | 3 | Pkinase | 479 | 513 | 1.2e-19 | 70.4 | 0.00039 | 0.83 | 8.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_635.1_17668.t1 | gi|5804911|emb|CAA41565.2| | tyrosine kinase [Homo sapiens] | 0.0 |
| pfu_aug2.0_635.1_17668.t1 | gi|528471051|ref|XP_005163456.1| | PREDICTED: tyrosine-protein kinase Lyn isoform X1 [Danio rerio] | 0.0 |
| pfu_aug2.0_635.1_17668.t1 | gi|52218930|ref|NP_001004543.1| | tyrosine-protein kinase Lyn [Danio rerio] | 0.0 |
| pfu_aug2.0_635.1_17668.t1 | gi|676433347|ref|XP_009046870.1| | hypothetical protein LOTGIDRAFT_172047 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_635.1_17668.t1 | gi|573892452|ref|XP_006633981.1| | PREDICTED: tyrosine-protein kinase Lyn-like isoform X2 [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_635.1_17668.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_635.1_17668.t1 atgactgagccagaggttgttccttaccaagctcacttggagtgtggtggttataaggactgtagcaaagaggtgcacta ttactgctttgaatgcaaactcagtttatgtgacacttgtaaactcctgaatttgcatacgacacatacattaaagtcct ggtgtgatcctgatgctattaatgctcgacgaaagggatcaatatgctgtcaaatgcatgagtataaagcatatactgca ttctgtctcacttgtcagatattgtgttgtgaaagatgtctggaaaatcattccagacacgtatgttctagcgttgatgc agtctacaatgaaatgcattctaaaatgtctggacaattgactgtgctacagaaaatataccagccaaaaacagagaaaa tgttggaagatgtgaatcatatggttcaaagatgcgagaatatatatgagcaaaactctaagagcataaaaagcagaatc gaatctttgaagaactacttggagaacatggaaaaagagttactcaagagaaatgaagaatcaaagagcaaatgtctagc tagagtgaatcaaaagttactggcgtcgaaatttagacaaactgggataaataaagcaataaaagatcttgaacggcatt tagataatactaacaaagaagttttcatctcagagaccaaacatattcttgatgttgaaagattaaaaccaccaacattt acgatggatctacatgagtatcatgccttcgaggcctcaaagtttgctataccaaacgtagctgtgtatgtaggcaactt gtatctacagaaacaagattttcctgaattgattcccctgacggcagatgcccaacaaatatcaccagaagacattgaac tgacaaaaatgatgtatgatggagaattctcaaaatgctggcatggaaaattgaagcattccagaaatgttacggtttgg ctgaaaaagaaagaatcgttgaatttgaaagctgtcgaaaaccagatcaacatcctcacagaatgtaaacatgaaaatgt cctggctttgatggcatcgtttttcaaagatgggcatttgtacttcgtgacagaaagcatgtcaaaaggaacattgacgt tatttttgcaagggaaagaaggttcactgcttcaattttcacaacttattagaattgcctgcaagatcgccaaaggaatg agctttcttgaggaaaaacacatcgtacacggcgaattgtctgcaaggaacatacttgttggtgatgacattgatgtcaa aataggagagtttcatttggcgaagagagaggaagacgatggggtgttaaaaggtgcgaatttcaaacgaagactaatac tgctggtagaaatcatcacctacggtcaaacaccttatcctggtttattaagcaaagagattcttggaaaagttgaggag ggattcagacataccaaaccaaaggattgtcctgacacgctgtactcaatcatgacgaagtgttggaagaaaagtccaga ggaacgtccgacttttgagtttctttccgactgttttgatcactatgaaatatattttgaaaatccatatggttacacgt ga |
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Protein
| Protein ID | pfu_aug2.0_635.1_17668.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_635.1_17668.t1 MTEPEVVPYQAHLECGGYKDCSKEVHYYCFECKLSLCDTCKLLNLHTTHTLKSWCDPDAINARRKGSICCQMHEYKAYTA FCLTCQILCCERCLENHSRHVCSSVDAVYNEMHSKMSGQLTVLQKIYQPKTEKMLEDVNHMVQRCENIYEQNSKSIKSRI ESLKNYLENMEKELLKRNEESKSKCLARVNQKLLASKFRQTGINKAIKDLERHLDNTNKEVFISETKHILDVERLKPPTF TMDLHEYHAFEASKFAIPNVAVYVGNLYLQKQDFPELIPLTADAQQISPEDIELTKMMYDGEFSKCWHGKLKHSRNVTVW LKKKESLNLKAVENQINILTECKHENVLALMASFFKDGHLYFVTESMSKGTLTLFLQGKEGSLLQFSQLIRIACKIAKGM SFLEEKHIVHGELSARNILVGDDIDVKIGEFHLAKREEDDGVLKGANFKRRLILLVEIITYGQTPYPGLLSKEILGKVEE GFRHTKPKDCPDTLYSIMTKCWKKSPEERPTFEFLSDCFDHYEIYFENPYGYT |
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