Gene
| Gene Model ID | pfu_aug2.0_635.1_17670 |
|---|---|
| Locus | scaffold635.1 : 144044 ... 149872 : - |
| To GenomeBrowser | scaffold635.1:144044..149872 |
| Genes list of scaffold | scaffold635.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine threonine-protein kinase rio3 | GO:0000166 GO:0001878 GO:0004715 GO:0005739 GO:0007155 GO:0007173 GO:0007417 GO:0030520 GO:0031234 GO:0036035 GO:0038083 GO:0042127 GO:0045087 GO:0045453 GO:0048008 GO:0050847 GO:0051427 GO:0051726 GO:0070851 GO:0071375 GO:0071801 GO:2001237 GO:2001243 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_635.1_17670.t1 | 1 | 1 | Pkinase_Tyr | 6 | 54 | 6.7e-13 | 48.3 | 1.1e-16 | 7.8e-13 | 48.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_635.1_17670.t1 | gi|339254034|ref|XP_003372240.1| | serine/threonine-protein kinase RIO3 [Trichinella spiralis] | 7.0e-20 |
| pfu_aug2.0_635.1_17670.t1 | gi|585716777|ref|XP_006825584.1| | PREDICTED: tyrosine-protein kinase Yes-like [Saccoglossus kowalevskii] | 9.0e-20 |
| pfu_aug2.0_635.1_17670.t1 | gi|241626599|ref|XP_002407931.1| | tyrosine kinase, putative [Ixodes scapularis] | 1.0e-19 |
| pfu_aug2.0_635.1_17670.t1 | gi|742115061|ref|XP_010873464.1| | PREDICTED: proto-oncogene tyrosine-protein kinase Src isoform X2 [Esox lucius] | 2.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_635.1_17670.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_635.1_17670.t1 atgggcagccgaataggaatgcaaaacagagaggttgtggaaaagaccgaaaagggatacagacatccaaaacctgagaa atgtccagatgcattgtacaacatcatgttgaaatgttgggacaagcaagctgtgaagaggccgacatttgaatacctgt ttggattctttgaggattacctagtctcctttgaacatgaatatgacgaaattgaggattga |
|
Protein
| Protein ID | pfu_aug2.0_635.1_17670.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_635.1_17670.t1 MGSRIGMQNREVVEKTEKGYRHPKPEKCPDALYNIMLKCWDKQAVKRPTFEYLFGFFEDYLVSFEHEYDEIED |
|