Gene
| Gene Model ID | pfu_aug2.0_635.1_17673 |
|---|---|
| Locus | scaffold635.1 : 230254 ... 255342 : - |
| To GenomeBrowser | scaffold635.1:230254..255342 |
| Genes list of scaffold | scaffold635.1 |
| Synonym | pfu_aug1.0_14519.1_18134 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tyrosine-protein kinase yes | GO:0004672 GO:0009987 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_635.1_17673.t1 | 2 | 1 | zf-B_box | 20 | 59 | 3.0e-07 | 30.2 | 9.0e-10 | 3.3e-06 | 26.8 |
| pfu_aug2.0_635.1_17673.t1 | 2 | 2 | zf-B_box | 73 | 90 | 3.0e-07 | 30.2 | 0.0071 | 26.0 | 4.8 |
| pfu_aug2.0_635.1_17673.t1 | 1 | 1 | Pkinase | 184 | 404 | 2.1e-24 | 86.0 | 8.9e-28 | 3.3e-24 | 85.4 |
| pfu_aug2.0_635.1_17673.t1 | 1 | 1 | Pkinase_Tyr | 209 | 396 | 2.8026e-45 | 154.4 | 0.0 | 4.2039e-45 | 153.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_635.1_17673.t1 | gi|410909283|ref|XP_003968120.1| | PREDICTED: tyrosine-protein kinase Yes [Takifugu rubripes] | 7.0e-40 |
| pfu_aug2.0_635.1_17673.t1 | gi|734628357|ref|XP_010742412.1| | PREDICTED: tyrosine-protein kinase Yes [Larimichthys crocea] | 1.0e-39 |
| pfu_aug2.0_635.1_17673.t1 | gi|736251717|ref|XP_010788239.1| | PREDICTED: tyrosine-protein kinase Yes [Notothenia coriiceps] | 1.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_635.1_17673.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_635.1_17673.t1 atgtctgataaagagtctgaagacgaagccagtgaagagtccttccagactcatgttgaatgcgatggatgtgatgagga agacagacccgtagtttggtactgcgtgacatgtaaagccagcgtatgtgacaaatgtaaaagtatgaagattcatagaa gtcataaagtcaagccatggcaagactcagaagctatatttgctcgacaaaatacaccagcgtcctgtggtgaccatcca aatgaggtaatcatgacattttgtgcaacataggaaaaggaaatatcatcgtctgattatgatttggaccaagaattgta tgatgacggcgaatgggtagctggaaatgttagcaacattccgtcttctcctgcttatggcgcttttgtttctcagctga tattgaatgccagggcatgttctaaatatgaagatttcatcattatctccagatggcttgcaaacaaatcatatcttctt ccagaggaaaaggaaaagccatgtgattatgagttggacataaaattctatgatgattgcgagtgggaagtttggaatgg aagaagaagaaagacaacaaacgttacaatttggaggacggttaaaaaacaaatatatgaccccgctggactcacggcgt tgaatattcttaaggaatgcaggcatgaaaatatcgtgagacttttggcgtcgtacgtccacgatgaacagcttcacttt gtaacagaaaagaagtccaaagcaattttaagagactatctcagagagaaaggcaacaaaggcattgaattctctcttct catggactttgcattccagattgcccatggtatgagctttttggagagcaaagacataatacatagaaatttagcgaccc acagtgtcctaattagtcatgactttaccctgagaataggagggattttccaagcaattgaaggcaagaacttgggatcg ctaaaagcattcagattcccaataaagtggactgctcctgaggctgtgttttatggtgaattctctatcaaaacagatgt atggtcgttcggtgtgctactagtagagatcgtcacatacggacaaacaccttatcctgagagaaggtctcaacatagca ccagacggttacatctacaaaaacaaaatcgtcaaagagataacaggatgttatggagatacgtcgagtccaactgctca gccatcatatcaacggagaacaacatccgcacaggctttggacgtcgacaacacaaccacccagctcactacgccggagt tgtagccaagcaaataatggacaaagtcaagagacgatggatggaggaagtcaacctcgtaccagccatctacacgtcgg aactactcaaacagaaggacagcgaccggaacgatgtcagcaaggctaccaacattcaactcttccaagtctaa |
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Protein
| Protein ID | pfu_aug2.0_635.1_17673.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_635.1_17673.t1 MSDKESEDEASEESFQTHVECDGCDEEDRPVVWYCVTCKASVCDKCKSMKIHRSHKVKPWQDSEAIFARQNTPASCGDHP NEVIMTFCATXEKEISSSDYDLDQELYDDGEWVAGNVSNIPSSPAYGAFVSQLILNARACSKYEDFIIISRWLANKSYLL PEEKEKPCDYELDIKFYDDCEWEVWNGRRRKTTNVTIWRTVKKQIYDPAGLTALNILKECRHENIVRLLASYVHDEQLHF VTEKKSKAILRDYLREKGNKGIEFSLLMDFAFQIAHGMSFLESKDIIHRNLATHSVLISHDFTLRIGGIFQAIEGKNLGS LKAFRFPIKWTAPEAVFYGEFSIKTDVWSFGVLLVEIVTYGQTPYPERRSQHSTRRLHLQKQNRQRDNRMLWRYVESNCS AIISTENNIRTGFGRRQHNHPAHYAGVVAKQIMDKVKRRWMEEVNLVPAIYTSELLKQKDSDRNDVSKATNIQLFQV |
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