Gene
| Gene Model ID | pfu_aug2.0_6360.1_02840 |
|---|---|
| Locus | scaffold6360.1 : 13406 ... 14497 : + |
| To GenomeBrowser | scaffold6360.1:13406..14497 |
| Genes list of scaffold | scaffold6360.1 |
| Synonym | pfu_aug1.0_21116.1_18772 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_6360.1_02840.t1 | 2 | 1 | zf-C2H2 | 16 | 39 | 1.1e-08 | 34.8 | 9.6e-08 | 7.9e-05 | 22.7 |
| pfu_aug2.0_6360.1_02840.t1 | 2 | 1 | zf-C2H2_4 | 16 | 38 | 1.0e-06 | 28.6 | 1.8e-05 | 0.015 | 15.5 |
| pfu_aug2.0_6360.1_02840.t1 | 2 | 2 | zf-C2H2 | 45 | 66 | 1.1e-08 | 34.8 | 5.6e-06 | 0.0046 | 17.2 |
| pfu_aug2.0_6360.1_02840.t1 | 2 | 2 | zf-C2H2_4 | 45 | 67 | 1.0e-06 | 28.6 | 2.7e-06 | 0.0022 | 18.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_6360.1_02840.t1 | gi|512994661|ref|XP_004858937.1| | PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 599 [Heterocephalus glaber] | 8.0e-07 |
| pfu_aug2.0_6360.1_02840.t1 | gi|512911969|ref|XP_004902204.1| | 9.0e-07 | |
| pfu_aug2.0_6360.1_02840.t1 | gi|694974354|ref|XP_009433552.1| | PREDICTED: zinc finger protein 599 [Pan troglodytes] | 2.0e-06 |
| pfu_aug2.0_6360.1_02840.t1 | gi|736302294|ref|XP_010793568.1| | PREDICTED: zinc finger protein 865-like [Notothenia coriiceps] | 2.0e-06 |
| pfu_aug2.0_6360.1_02840.t1 | gi|586494119|ref|XP_006877504.1| | PREDICTED: zinc finger protein 449-like [Chrysochloris asiatica] | 2.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_6360.1_02840.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_6360.1_02840.t1 atgaatgaaatagctccatgtttctttcagatggcacctgctacatttgaatgtgtactatgtggcaaatcctacacaca tcgctctgcactactccgtcataatcgaacggtccatggtggagataccgtcaaatgtgaattttgtggacaaaattttt gtcgaaaagatagctatcttcgacacttaaagtcacatcataaaagtagacataacggaaatgaaatccataccacgcag caagggggtggtaaacctgagggtgcagacatatcagaactgcaagtcaatgaacccaacgatgacgaagaaacttgctt ttctgaggaagaggctatcaatgggaatctcaacaatattaccatgaaagcagaagatcaaccgggatatgattcattga cttttcttaaatcgaaagaagaatccactagattactattgaaaaaagccttattgaagcggcgagggatgaaggtgtac attaccatgcaaacagagaggagaccaagtggagacaactga |
|
Protein
| Protein ID | pfu_aug2.0_6360.1_02840.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_6360.1_02840.t1 MNEIAPCFFQMAPATFECVLCGKSYTHRSALLRHNRTVHGGDTVKCEFCGQNFCRKDSYLRHLKSHHKSRHNGNEIHTTQ QGGGKPEGADISELQVNEPNDDEETCFSEEEAINGNLNNITMKAEDQPGYDSLTFLKSKEESTRLLLKKALLKRRGMKVY ITMQTERRPSGDN |
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