Gene
| Gene Model ID | pfu_aug2.0_6393.1_12870 |
|---|---|
| Locus | scaffold6393.1 : 11446 ... 19843 : + |
| To GenomeBrowser | scaffold6393.1:11446..19843 |
| Genes list of scaffold | scaffold6393.1 |
| Synonym | pfu_aug1.0_1795.1_22761 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_6393.1_12870.t1 | 1 | 1 | Lipocalin | 5 | 97 | 4.8e-12 | 46.0 | 8.6e-16 | 6.4e-12 | 45.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_6393.1_12870.t1 | gi|676448283|ref|XP_009051682.1| | hypothetical protein LOTGIDRAFT_152943 [Lottia gigantea] | 2.0e-32 |
| pfu_aug2.0_6393.1_12870.t1 | gi|198431075|ref|XP_002127826.1| | PREDICTED: fatty acid-binding protein, brain-like [Ciona intestinalis] | 2.0e-15 |
| pfu_aug2.0_6393.1_12870.t1 | gi|556968411|ref|XP_005993192.1| | PREDICTED: fatty acid-binding protein, heart [Latimeria chalumnae] | 8.0e-15 |
| pfu_aug2.0_6393.1_12870.t1 | gi|686619105|ref|XP_009286570.1| | PREDICTED: fatty acid-binding protein, heart [Aptenodytes forsteri] | 5.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_6393.1_12870.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_6393.1_12870.t1 atggcttcgctcaatggaacatggaaacttataaagatagagaagttcgaagaatttatgaaggctatagatgttaatga ggagaacatacagaaagggctgaaactgttgacaccagaaaacgacataaaacaggagatatcggtggaaggagacaagg tctgtatcaagacggtcactccattgtcaacacaggaacacaaaggaaacattgggcaggagtttgatcaacccggctgg gatggtagaccggtcaaggcaatatttacacttgatggtgacaaattggtagagaatctatctggtccgtacacagcctc taacacccgctacataaaggatgggaatctaataatg |
|
Protein
| Protein ID | pfu_aug2.0_6393.1_12870.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_6393.1_12870.t1 MASLNGTWKLIKIEKFEEFMKAIDVNEENIQKGLKLLTPENDIKQEISVEGDKVCIKTVTPLSTQEHKGNIGQEFDQPGW DGRPVKAIFTLDGDKLVENLSGPYTASNTRYIKDGNLIM |
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