Gene
| Gene Model ID | pfu_aug2.0_64.1_13507 |
|---|---|
| Locus | scaffold64.1 : 27346 ... 35460 : + |
| To GenomeBrowser | scaffold64.1:27346..35460 |
| Genes list of scaffold | scaffold64.1 |
| Synonym | pfu_aug1.0_585.1_36598 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_64.1_13507.t1 | 2 | 1 | 7tm_1 | 1 | 193 | 1.2e-37 | 129.4 | 5.70006e-41 | 1.2e-37 | 129.4 |
| pfu_aug2.0_64.1_13507.t1 | 1 | 1 | 7TM_GPCR_Srv | 1 | 208 | 2.1e-06 | 27.1 | 1.2e-09 | 2.5e-06 | 26.8 |
| pfu_aug2.0_64.1_13507.t1 | 2 | 2 | 7tm_1 | 222 | 231 | 1.2e-37 | 129.4 | 3.0 | 6300.0 | -4.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_64.1_13507.t1 | gi|676496061|ref|XP_009067091.1| | hypothetical protein LOTGIDRAFT_51656, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_64.1_13507.t1 | gi|260833474|ref|XP_002611682.1| | hypothetical protein BRAFLDRAFT_63634 [Branchiostoma floridae] | 1.0e-37 |
| pfu_aug2.0_64.1_13507.t1 | gi|556978781|ref|XP_005996397.1| | PREDICTED: G-protein coupled receptor 54-like, partial [Latimeria chalumnae] | 3.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_64.1_13507.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_64.1_13507.t1 atgaccatcgaccgctaccatgctattgtgaatgctgttcgctccatgaactggaggtcacgtcgagcatccagtattgt ttgtctctctgtttgggcggtttctttactcatctcgcttccctttgctttgttccatggtacaatggacgttatggagt tcggtgagaaattaacatattgcaaggaaaaatggccgagtgccgagttcggaaaggtgacagagatgttggtaatatgc actacgttcgttattcctttggttatcattgtcgtctgctactaccagattgtgagaaatctgtggacacgatcccgcca agaagttaaacgtcagaatgatgccaacaacgctgcaacgccactatcaggggcgtcacagatacgtcggcggcgtaaag tgaccagaatggtagccatagttgtgttgttatttgctaccttctggtttcctattcacgtattcaacatataccgcatt cttcacccaagttatcccagaacaacggcgttatatattttcaaaatatttggacatacactgtcgttcgccaactcctg tgtcaatccattcgtatatgcgtttttaaatgacgcctttaagaaggctttctcaaagacatttcctttcataagcaagc tatgtccatgcgccagggtgacgtcagatgaccgatatactcaagtgacgggaatggtggatcaagctattcaagctatg ccgtgtgatgacgtcaacggtaatggtggaacagaactagtatccatctcagaacgtaaaaactctgtgtgtaaaaatgc taacagtttgaatcactag |
|
Protein
| Protein ID | pfu_aug2.0_64.1_13507.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_64.1_13507.t1 MTIDRYHAIVNAVRSMNWRSRRASSIVCLSVWAVSLLISLPFALFHGTMDVMEFGEKLTYCKEKWPSAEFGKVTEMLVIC TTFVIPLVIIVVCYYQIVRNLWTRSRQEVKRQNDANNAATPLSGASQIRRRRKVTRMVAIVVLLFATFWFPIHVFNIYRI LHPSYPRTTALYIFKIFGHTLSFANSCVNPFVYAFLNDAFKKAFSKTFPFISKLCPCARVTSDDRYTQVTGMVDQAIQAM PCDDVNGNGGTELVSISERKNSVCKNANSLNH |
|