Gene
| Gene Model ID | pfu_aug2.0_64.1_13511 |
|---|---|
| Locus | scaffold64.1 : 145424 ... 146245 : - |
| To GenomeBrowser | scaffold64.1:145424..146245 |
| Genes list of scaffold | scaffold64.1 |
| Synonym | pfu_aug1.0_245423.1_50231 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_64.1_13511.t1 | 1 | 1 | Tctex-1 | 82 | 180 | 1.3e-25 | 89.2 | 1.4e-29 | 2.1e-25 | 88.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_64.1_13511.t1 | gi|260823970|ref|XP_002606941.1| | hypothetical protein BRAFLDRAFT_126378 [Branchiostoma floridae] | 5.0e-34 |
| pfu_aug2.0_64.1_13511.t1 | gi|512837372|ref|XP_002939022.2| | PREDICTED: tctex1 domain-containing protein 1 [Xenopus (Silurana) tropicalis] | 6.0e-34 |
| pfu_aug2.0_64.1_13511.t1 | gi|602626693|ref|XP_007420300.1| | PREDICTED: tctex1 domain-containing protein 4 [Python bivittatus] | 8.0e-34 |
Transcript
| Transcript ID | pfu_aug2.0_64.1_13511.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_64.1_13511.t1 atgtccatcatttcgaaatcttcaacacaagatgagccaaaagcaccctccaaagaaagcctgaatcgacgtcgatcgac attcaaaggtgttgcttcttccatagcgagtatgctcagtatgaaaaaactctacacgaaacgacgatccagtgttgtcg cttccgacatacagcgaccgaaagtgcggatggagaacacatacaaaacaaaaccggacgacgggaaggaattcaaatca accgcggtggataactttgtttacgaacttttagaaaaggtattaaacaatgaaaaatataactcagcaaactgtagcag acttgcgtgtgacctttctgttttgattaaaaacagaattaaagatttaaatttcccgcgctacaagataatatgtcagg tgattatcggacagatgggcgagcaaggaatggaaactgccagcaggtgtctatgggacacagctacagatagatgtagt acggtgtcgtacaaaaataactccctgtgggcggtagctacagtacatgccgtttattacgaataa |
|
Protein
| Protein ID | pfu_aug2.0_64.1_13511.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_64.1_13511.t1 MSIISKSSTQDEPKAPSKESLNRRRSTFKGVASSIASMLSMKKLYTKRRSSVVASDIQRPKVRMENTYKTKPDDGKEFKS TAVDNFVYELLEKVLNNEKYNSANCSRLACDLSVLIKNRIKDLNFPRYKIICQVIIGQMGEQGMETASRCLWDTATDRCS TVSYKNNSLWAVATVHAVYYE |
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