Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_64.1_13518
Locus scaffold64.1 : 260170 ... 286171 : +
To GenomeBrowser scaffold64.1:260170..286171
Genes list of scaffold scaffold64.1
Synonym pfu_aug1.0_5668.1_31010

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_64.1_13518.t4 1 1 ANTH 1 193 6.1e-36 123.5 7.2e-40 1.1e-35 122.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_64.1_13518.t4 gi|524867644|ref|XP_005090630.1| PREDICTED: clathrin coat assembly protein AP180-like isoform X2 [Aplysia californica] 0.0
pfu_aug2.0_64.1_13518.t4 gi|524867642|ref|XP_005090629.1| PREDICTED: clathrin coat assembly protein AP180-like isoform X1 [Aplysia californica] 0.0
pfu_aug2.0_64.1_13518.t4 gi|571544409|ref|XP_006563901.1| PREDICTED: phosphatidylinositol-binding clathrin assembly protein LAP isoform X21 [Apis mellifera] 0.0

Transcript
Transcript IDpfu_aug2.0_64.1_13518.t1
Definition-
>pfu_aug2.0_64.1_13518.t1
atgaactatggcaatgaaaggttcacacagtatcttgcatcaaataattgttcatttcaactcggcagtttcattgacaa
gggaggtgtacaagggtatgacatgtcaacatttattagaagatattccaaatacttgaatgaaaaagctgtgtcatata
gaagcatggcatttgacttctgtaaagtcaggagagggaaagatgacgggttattaagaacaatgaatgcagataaatta
ttaaaaacattaccagcacttcaacagcagttagatgcacttttagaatttgattgtacatccaatgaattaacaaatgg
agtaataaatgcctgctttctccttatgtttaaagatttaatacgactttttgcatgttacaatgatggagtcatcaatc
tactagattggttaatctttagattttcaaaacaatggaacaaaaatcttcacgtttttgaaaacaagagaaatgtatta
ggtgggtacttattaaagagtgtcggaatcgacaaaagtgatataccagatctggccaaggctccatctagtttgttaga
tgcgttagagcagcattaccaggccctagacagtaaaaaaggggtgacaactccaggaactgcctctaagcctgcagggt
ttacatcagctatcaacacaatttccaataatacaccagaaatccagatctcggaagaagagaaaaaacgtattctggat
gaagaaaacgccagacttcaacaactcaaggatgatcactcctcagatacccttgactctgctaacaaggaacaaagatt
aaaagaaacgggaggtcagaccacacagaatgccacgtcacaaaataatccgtttgctacgggaacgccggcagcaacaa
caaatgacattttcgggtcacctacaaaatctcagcctgattcagcaagacctagtgatgacctgatgaatttaacggga
aatccgtttgtacaaaatgttcaaaatgtaatggcaatgaatgccgttactagcgccatgagcagccaaaactcctttgc
tacccctcagtggaacgcagccaatcccaatgtgccagcaaccactggaacgttttcgtctgaggttgattttgacaaag
ttttcccaaattctacaggcccaactggaaccccaggacagacgggtattaacgcgggcatgttacaaccagctctctct
accaatacccaaggttttgatgcatttggagaggtaatgaagccaaccattcagtcagacttgatggccggcaaacaaaa
cgagaagttgattcattcagatctagatagtagtctggcacaactggctgggaacctcaacatcaaaggctcaggatcac
aggtcaaaaaacagcaacacgagtggcaaccgaaaggagagcagaaaataacgggtggtcaaaactggagtggtaaaccg
gctatggcatcaacgacctggacccaaccatcgtaccaacaacctatgtacaagttaaaaggcttaatcaataatgtatc
aatttatggcagcgcctggtatgggatatcaaggaatgatgcagcccggtatggttggaatgcgtccaatgggtatgcag
cctcagccagtgggaatgcagcctggtatgatgaatcagccaatgggagtagggatgatgcaacagccaatgtatggcgc
aggaatgcaaccgatgggaacgggctatatgcagcagcctcgaccgccccaacagaacggaagcgatccttttggtgctt
tatgaaagcagtacaatgtggggtgaaaatggtattggcaggaactgttgacatgtga
Transcript IDpfu_aug2.0_64.1_13518.t2
Definition-
>pfu_aug2.0_64.1_13518.t2
atgaactatggcaatgaaaggttcacacagtatcttgcatcaaataattgttcatttcaactcggcagtttcattgacaa
gggaggtgtacaagggtatgacatgtcaacatttattagaagatattccaaatacttgaatgaaaaagctgtgtcatata
gaagcatggcatttgacttctgtaaagtcaggagagggaaagatgacgggttattaagaacaatgaatgcagataaatta
ttaaaaacattaccagcacttcaacagcagttagatgcacttttagaatttgattgtacatccaatgaattaacaaatgg
agtaataaatgcctgctttctccttatgtttaaagatttaatacgactttttgcatgttacaatgatggagtcatcaatc
tactagattggttaatctttagattttcaaaacaatggaacaaaaatcttcacgtttttgaaaacaagagaaatgtatta
ggtgggtacttattaaagagtgtcggaatcgacaaaagtgatataccagatctggccaaggctccatctagtttgttaga
tgcgttagagcagcattaccaggccctagacagtaaaaaaggggtgacaactccaggaactgcctctaagcctgcagggt
ttacatcagctatcaacacaatttccaataatacaccagaaatccagatctcggaagaagagaaaaaacgtattctggat
gaagaaaacgccagacttcaacaactcaaggatgatcactcctcagatacccttgactctgctaacaaggaacaaagatt
aaaagaaacgggaggtcagaccacacagaatgccacgtcacaaaataatccgtttgctacgggaacgccggcagcaacaa
caaatgacattttcgggtcacctacaaaatctcagcctgattcagcaagacctagtgatgacctgatgaatttaacggga
aatccgtttgtacaaaatgttcaaaatgtaatggcaatgaatgccgttactagcgccatgagcagccaaaactcctttgc
tacccctcagtggaacgcagccaatcccaatgtgccagcaaccactggaacgttttcgtctgaggttgattttgacaaag
ttttcccaaattctacaggcccaactggttttgatgcatttggagaggtaatgaagccaaccattcagtcagacttgatg
gccggcaaacaaaacgagaagttgattcattcagatctagatagtagtctggcacaactggctgggaacctcaacatcaa
aggctcaggatcacaggtcaaaaaacagcaacacgagtggcaaccgaaaggagagcagaaaataacgggtggtcaaaact
ggagtggtaaaccggctatggcatcaacgacctggacccaaccatcgtaccaacaacctatgtacaagttaaaaggctta
atcaataatgtatcaatttatggcagcgcctggtatgggatatcaaggaatgatgcagcccggtatggttggaatgcgtc
caatgggtatgcagcctcagccagtgggaatgcagcctggtatgatgaatcagccaatgggagtagggatgatgcaacag
ccaatgtatggcgcaggaatgcaaccgatgggaacgggctatatgcagcagcctcgaccgccccaacagaacggaagcga
tccttttggtgctttatgaaagcagtacaatgtggggtgaaaatggtattggcaggaactgttgacatgtga
Transcript IDpfu_aug2.0_64.1_13518.t3
Definition-
>pfu_aug2.0_64.1_13518.t3
atgaactatggcaatgaaaggttcacacagtatcttgcatcaaataattgttcatttcaactcggcagtttcattgacaa
gggaggtgtacaagggtatgacatgtcaacatttattagaagatattccaaatacttgaatgaaaaagctgtgtcatata
gaagcatggcatttgacttctgtaaagtcaggagagggaaagatgacgggttattaagaacaatgaatgcagataaatta
ttaaaaacattaccagcacttcaacagcagttagatgcacttttagaatttgattgtacatccaatgaattaacaaatgg
agtaataaatgcctgctttctccttatgtttaaagatttaatacgactttttgcatgttacaatgatggagtcatcaatc
tactagattggttaatctttagattttcaaaacaatggaacaaaaatcttcacgtttttgaaaacaagagaaatgtatta
ggtgggtacttattaaagagtgtcggaatcgacaaaagtgatataccagatctggccaaggctccatctagtttgttaga
tgcgttagagcagcattaccaggccctagacagtaaaaaaggggtgacaactccaggaactgcctctaagcctgcagggt
ttacatcagctatcaacacaatttccaataatacaccagaaatccagatctcggaagaagagaaaaaacgtattctggat
gaagaaaacgccagacttcaacaactcaaggaacaaagattaaaagaaacgggaggtcagaccacacagaatgccacgtc
acaaaataatccgtttgctacgggaacgccggcagcaacaacaaatgacattttcgggtcacctacaaaatctcagcctg
attcagcaagacctagtgatgacctgatgaatttaacgggaaatccgtttgtacaaaatgttcaaaatgtaatggcaatg
aatgccgttactagcgccatgagcagccaaaactcctttgctacccctcagtggaacgcagccaatcccaatgtgccagc
aaccactggaacgttttcgtctgaggttgattttgacaaagttttcccaaattctacaggcccaactggaaccccaggac
agacgggtattaacgcgggcatgttacaaccagctctctctaccaatacccaaggttttgatgcatttggagaggtaatg
aagccaaccattcagtcagacttgatggccggcaaacaaaacgagaagttgattcattcagatctagatagtagtctggc
acaactggctgggaacctcaacatcaaaggctcaggatcacaggtcaaaaaacagcaacacgagtggcaaccgaaaggag
agcagaaaataacgggtggtcaaaactggagtggtaaaccggctatggcatcaacgacctggacccaaccatcgtaccaa
caacctatgtacaagttaaaaggcttaatcaataatgtatcaatttatggcagcgcctggtatgggatatcaaggaatga
tgcagcccggtatggttggaatgcgtccaatgggtatgcagcctcagccagtgggaatgcagcctggtatgatgaatcag
ccaatgggagtagggatgatgcaacagccaatgtatggcgcaggaatgcaaccgatgggaacgggctatatgcagcagcc
tcgaccgccccaacagaacggaagcgatccttttggtgctttatgaaagcagtacaatgtggggtgaaaatggtattggc
aggaactgttgacatgtga
Transcript IDpfu_aug2.0_64.1_13518.t4
Definition-
>pfu_aug2.0_64.1_13518.t4
atgaactatggcaatgaaaggttcacacagtatcttgcatcaaataattgttcatttcaactcggcagtttcattgacaa
gggaggtgtacaagggtatgacatgtcaacatttattagaagatattccaaatacttgaatgaaaaagctgtgtcatata
gaagcatggcatttgacttctgtaaagtcaggagagggaaagatgacgggttattaagaacaatgaatgcagataaatta
ttaaaaacattaccagcacttcaacagcagttagatgcacttttagaatttgattgtacatccaatgaattaacaaatgg
agtaataaatgcctgctttctccttatgtttaaagatttaatacgactttttgcatgttacaatgatggagtcatcaatc
tactagattggttaatctttagattttcaaaacaatggaacaaaaatcttcacgtttttgaaaacaagagaaatgtatta
ggtgggtacttattaaagagtgtcggaatcgacaaaagtgatataccagatctggccaaggctccatctagtttgttaga
tgcgttagagcagcattaccaggccctagacagtaaaaaaggggtgacaactccaggaactgcctctaagcctgcagggt
ttacatcagctatcaacacaatttccaataatacaccagaaatccagatctcggaagaagagaaaaaacgtattctggat
gaagaaaacgccagacttcaacaactcaaggatgatcactcctcagatacccttgactctgctaacaaggaacaaagatt
aaaagaaacgggaggtcagaccacacagaatgccacgtcacaaaataatccgtttgctacgggaacgccggcagcaacaa
caaatgacattttcgggtcacctacaaaatctcagcctgattcagcaagacctagtgatgacctgatgaatttaacggga
aatccgtttgtacaaaatgttcaaaatgtaatggcaatgaatgccgttactagcgccatgagcagccaaaactcctttgc
tacccctcagtggaacgcagccaatcccaatgtgccagcaaccactggaacgttttcgtctgaggttgattttgacaaag
ttttcccaaattctacaggcccaactggaaccccaggacagacgggtattaacgcgggcatgttacaaccagctctctct
accaatacccaagctacggaggattcttttgatccgttggattctctgtcagggggaggtaacactttcactaccagtac
cgagcaggcccttggcgggatatttagtctcgacacccaacaaggaaatacagatttgtttatgagtaccccttctgggg
cccctactggtgtgacccctgatctatttatgggtacttcaaccacacctgcatcagaaggggggataagcacatgtccc
ttgactggcctgaacccctctacagcttacacaggctctcctatgttacctagagctagcccagctttacatcatagaag
tcttacgcccacttatatggaacaagctgccccgggacgtactagtcctgcccttgtggaggacacagcctcaggttttg
atgcatttggagaggtaatgaagccaaccattcagtcagacttgatggccggcaaacaaaacgagaagttgattcattca
gatctagatagtagtctggcacaactggctgggaacctcaacatcaaaggctcaggatcacaggtcaaaaaacagcaaca
cgagtggcaaccgaaaggagagcagaaaataacgggtggtcaaaactggagtggtaaaccggctatggcatcaacgacct
ggacccaaccatcgtaccaacaacctatgtacaagttaaaaggcttaatcaataatgtatcaatttatggcagcgcctgg
tatgggatatcaaggaatgatgcagcccggtatggttggaatgcgtccaatgggtatgcagcctcagccagtgggaatgc
agcctggtatgatgaatcagccaatgggagtagggatgatgcaacagccaatgtatggcgcaggaatgcaaccgatggga
acgggctatatgcagcagcctcgaccgccccaacagaacggaagcgatccttttggtgctttatgaaagcagtacaatgt
ggggtgaaaatggtattggcaggaactgttgacatgtga

Protein
Protein IDpfu_aug2.0_64.1_13518.t1
Definition-
>pfu_aug2.0_64.1_13518.t1
MNYGNERFTQYLASNNCSFQLGSFIDKGGVQGYDMSTFIRRYSKYLNEKAVSYRSMAFDFCKVRRGKDDGLLRTMNADKL
LKTLPALQQQLDALLEFDCTSNELTNGVINACFLLMFKDLIRLFACYNDGVINLLDWLIFRFSKQWNKNLHVFENKRNVL
GGYLLKSVGIDKSDIPDLAKAPSSLLDALEQHYQALDSKKGVTTPGTASKPAGFTSAINTISNNTPEIQISEEEKKRILD
EENARLQQLKDDHSSDTLDSANKEQRLKETGGQTTQNATSQNNPFATGTPAATTNDIFGSPTKSQPDSARPSDDLMNLTG
NPFVQNVQNVMAMNAVTSAMSSQNSFATPQWNAANPNVPATTGTFSSEVDFDKVFPNSTGPTGTPGQTGINAGMLQPALS
TNTQGFDAFGEVMKPTIQSDLMAGKQNEKLIHSDLDSSLAQLAGNLNIKGSGSQVKKQQHEWQPKGEQKITGGQNWSGKP
AMASTTWTQPSYQQPMYKLKGLINNVSIYGSAWYGISRNDAARYGWNASNGYAASASGNAAWYDESANGSRDDATANVWR
RNATDGNGLYAAASTAPTERKRSFWCFMKAVQCGVKMVLAGTVDM
Protein IDpfu_aug2.0_64.1_13518.t2
Definition-
>pfu_aug2.0_64.1_13518.t2
MNYGNERFTQYLASNNCSFQLGSFIDKGGVQGYDMSTFIRRYSKYLNEKAVSYRSMAFDFCKVRRGKDDGLLRTMNADKL
LKTLPALQQQLDALLEFDCTSNELTNGVINACFLLMFKDLIRLFACYNDGVINLLDWLIFRFSKQWNKNLHVFENKRNVL
GGYLLKSVGIDKSDIPDLAKAPSSLLDALEQHYQALDSKKGVTTPGTASKPAGFTSAINTISNNTPEIQISEEEKKRILD
EENARLQQLKDDHSSDTLDSANKEQRLKETGGQTTQNATSQNNPFATGTPAATTNDIFGSPTKSQPDSARPSDDLMNLTG
NPFVQNVQNVMAMNAVTSAMSSQNSFATPQWNAANPNVPATTGTFSSEVDFDKVFPNSTGPTGFDAFGEVMKPTIQSDLM
AGKQNEKLIHSDLDSSLAQLAGNLNIKGSGSQVKKQQHEWQPKGEQKITGGQNWSGKPAMASTTWTQPSYQQPMYKLKGL
INNVSIYGSAWYGISRNDAARYGWNASNGYAASASGNAAWYDESANGSRDDATANVWRRNATDGNGLYAAASTAPTERKR
SFWCFMKAVQCGVKMVLAGTVDM
Protein IDpfu_aug2.0_64.1_13518.t3
Definition-
>pfu_aug2.0_64.1_13518.t3
MNYGNERFTQYLASNNCSFQLGSFIDKGGVQGYDMSTFIRRYSKYLNEKAVSYRSMAFDFCKVRRGKDDGLLRTMNADKL
LKTLPALQQQLDALLEFDCTSNELTNGVINACFLLMFKDLIRLFACYNDGVINLLDWLIFRFSKQWNKNLHVFENKRNVL
GGYLLKSVGIDKSDIPDLAKAPSSLLDALEQHYQALDSKKGVTTPGTASKPAGFTSAINTISNNTPEIQISEEEKKRILD
EENARLQQLKEQRLKETGGQTTQNATSQNNPFATGTPAATTNDIFGSPTKSQPDSARPSDDLMNLTGNPFVQNVQNVMAM
NAVTSAMSSQNSFATPQWNAANPNVPATTGTFSSEVDFDKVFPNSTGPTGTPGQTGINAGMLQPALSTNTQGFDAFGEVM
KPTIQSDLMAGKQNEKLIHSDLDSSLAQLAGNLNIKGSGSQVKKQQHEWQPKGEQKITGGQNWSGKPAMASTTWTQPSYQ
QPMYKLKGLINNVSIYGSAWYGISRNDAARYGWNASNGYAASASGNAAWYDESANGSRDDATANVWRRNATDGNGLYAAA
STAPTERKRSFWCFMKAVQCGVKMVLAGTVDM
Protein IDpfu_aug2.0_64.1_13518.t4
Definition-
>pfu_aug2.0_64.1_13518.t4
MNYGNERFTQYLASNNCSFQLGSFIDKGGVQGYDMSTFIRRYSKYLNEKAVSYRSMAFDFCKVRRGKDDGLLRTMNADKL
LKTLPALQQQLDALLEFDCTSNELTNGVINACFLLMFKDLIRLFACYNDGVINLLDWLIFRFSKQWNKNLHVFENKRNVL
GGYLLKSVGIDKSDIPDLAKAPSSLLDALEQHYQALDSKKGVTTPGTASKPAGFTSAINTISNNTPEIQISEEEKKRILD
EENARLQQLKDDHSSDTLDSANKEQRLKETGGQTTQNATSQNNPFATGTPAATTNDIFGSPTKSQPDSARPSDDLMNLTG
NPFVQNVQNVMAMNAVTSAMSSQNSFATPQWNAANPNVPATTGTFSSEVDFDKVFPNSTGPTGTPGQTGINAGMLQPALS
TNTQATEDSFDPLDSLSGGGNTFTTSTEQALGGIFSLDTQQGNTDLFMSTPSGAPTGVTPDLFMGTSTTPASEGGISTCP
LTGLNPSTAYTGSPMLPRASPALHHRSLTPTYMEQAAPGRTSPALVEDTASGFDAFGEVMKPTIQSDLMAGKQNEKLIHS
DLDSSLAQLAGNLNIKGSGSQVKKQQHEWQPKGEQKITGGQNWSGKPAMASTTWTQPSYQQPMYKLKGLINNVSIYGSAW
YGISRNDAARYGWNASNGYAASASGNAAWYDESANGSRDDATANVWRRNATDGNGLYAAASTAPTERKRSFWCFMKAVQC
GVKMVLAGTVDM

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495