Gene
| Gene Model ID | pfu_aug2.0_64.1_13518 |
|---|---|
| Locus | scaffold64.1 : 260170 ... 286171 : + |
| To GenomeBrowser | scaffold64.1:260170..286171 |
| Genes list of scaffold | scaffold64.1 |
| Synonym | pfu_aug1.0_5668.1_31010 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_64.1_13518.t4 | 1 | 1 | ANTH | 1 | 193 | 6.1e-36 | 123.5 | 7.2e-40 | 1.1e-35 | 122.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_64.1_13518.t4 | gi|524867644|ref|XP_005090630.1| | PREDICTED: clathrin coat assembly protein AP180-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_64.1_13518.t4 | gi|524867642|ref|XP_005090629.1| | PREDICTED: clathrin coat assembly protein AP180-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_64.1_13518.t4 | gi|571544409|ref|XP_006563901.1| | PREDICTED: phosphatidylinositol-binding clathrin assembly protein LAP isoform X21 [Apis mellifera] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_64.1_13518.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_64.1_13518.t1 atgaactatggcaatgaaaggttcacacagtatcttgcatcaaataattgttcatttcaactcggcagtttcattgacaa gggaggtgtacaagggtatgacatgtcaacatttattagaagatattccaaatacttgaatgaaaaagctgtgtcatata gaagcatggcatttgacttctgtaaagtcaggagagggaaagatgacgggttattaagaacaatgaatgcagataaatta ttaaaaacattaccagcacttcaacagcagttagatgcacttttagaatttgattgtacatccaatgaattaacaaatgg agtaataaatgcctgctttctccttatgtttaaagatttaatacgactttttgcatgttacaatgatggagtcatcaatc tactagattggttaatctttagattttcaaaacaatggaacaaaaatcttcacgtttttgaaaacaagagaaatgtatta ggtgggtacttattaaagagtgtcggaatcgacaaaagtgatataccagatctggccaaggctccatctagtttgttaga tgcgttagagcagcattaccaggccctagacagtaaaaaaggggtgacaactccaggaactgcctctaagcctgcagggt ttacatcagctatcaacacaatttccaataatacaccagaaatccagatctcggaagaagagaaaaaacgtattctggat gaagaaaacgccagacttcaacaactcaaggatgatcactcctcagatacccttgactctgctaacaaggaacaaagatt aaaagaaacgggaggtcagaccacacagaatgccacgtcacaaaataatccgtttgctacgggaacgccggcagcaacaa caaatgacattttcgggtcacctacaaaatctcagcctgattcagcaagacctagtgatgacctgatgaatttaacggga aatccgtttgtacaaaatgttcaaaatgtaatggcaatgaatgccgttactagcgccatgagcagccaaaactcctttgc tacccctcagtggaacgcagccaatcccaatgtgccagcaaccactggaacgttttcgtctgaggttgattttgacaaag ttttcccaaattctacaggcccaactggaaccccaggacagacgggtattaacgcgggcatgttacaaccagctctctct accaatacccaaggttttgatgcatttggagaggtaatgaagccaaccattcagtcagacttgatggccggcaaacaaaa cgagaagttgattcattcagatctagatagtagtctggcacaactggctgggaacctcaacatcaaaggctcaggatcac aggtcaaaaaacagcaacacgagtggcaaccgaaaggagagcagaaaataacgggtggtcaaaactggagtggtaaaccg gctatggcatcaacgacctggacccaaccatcgtaccaacaacctatgtacaagttaaaaggcttaatcaataatgtatc aatttatggcagcgcctggtatgggatatcaaggaatgatgcagcccggtatggttggaatgcgtccaatgggtatgcag cctcagccagtgggaatgcagcctggtatgatgaatcagccaatgggagtagggatgatgcaacagccaatgtatggcgc aggaatgcaaccgatgggaacgggctatatgcagcagcctcgaccgccccaacagaacggaagcgatccttttggtgctt tatgaaagcagtacaatgtggggtgaaaatggtattggcaggaactgttgacatgtga |
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| Transcript ID | pfu_aug2.0_64.1_13518.t2 |
| Definition | - |
>pfu_aug2.0_64.1_13518.t2 atgaactatggcaatgaaaggttcacacagtatcttgcatcaaataattgttcatttcaactcggcagtttcattgacaa gggaggtgtacaagggtatgacatgtcaacatttattagaagatattccaaatacttgaatgaaaaagctgtgtcatata gaagcatggcatttgacttctgtaaagtcaggagagggaaagatgacgggttattaagaacaatgaatgcagataaatta ttaaaaacattaccagcacttcaacagcagttagatgcacttttagaatttgattgtacatccaatgaattaacaaatgg agtaataaatgcctgctttctccttatgtttaaagatttaatacgactttttgcatgttacaatgatggagtcatcaatc tactagattggttaatctttagattttcaaaacaatggaacaaaaatcttcacgtttttgaaaacaagagaaatgtatta ggtgggtacttattaaagagtgtcggaatcgacaaaagtgatataccagatctggccaaggctccatctagtttgttaga tgcgttagagcagcattaccaggccctagacagtaaaaaaggggtgacaactccaggaactgcctctaagcctgcagggt ttacatcagctatcaacacaatttccaataatacaccagaaatccagatctcggaagaagagaaaaaacgtattctggat gaagaaaacgccagacttcaacaactcaaggatgatcactcctcagatacccttgactctgctaacaaggaacaaagatt aaaagaaacgggaggtcagaccacacagaatgccacgtcacaaaataatccgtttgctacgggaacgccggcagcaacaa caaatgacattttcgggtcacctacaaaatctcagcctgattcagcaagacctagtgatgacctgatgaatttaacggga aatccgtttgtacaaaatgttcaaaatgtaatggcaatgaatgccgttactagcgccatgagcagccaaaactcctttgc tacccctcagtggaacgcagccaatcccaatgtgccagcaaccactggaacgttttcgtctgaggttgattttgacaaag ttttcccaaattctacaggcccaactggttttgatgcatttggagaggtaatgaagccaaccattcagtcagacttgatg gccggcaaacaaaacgagaagttgattcattcagatctagatagtagtctggcacaactggctgggaacctcaacatcaa aggctcaggatcacaggtcaaaaaacagcaacacgagtggcaaccgaaaggagagcagaaaataacgggtggtcaaaact ggagtggtaaaccggctatggcatcaacgacctggacccaaccatcgtaccaacaacctatgtacaagttaaaaggctta atcaataatgtatcaatttatggcagcgcctggtatgggatatcaaggaatgatgcagcccggtatggttggaatgcgtc caatgggtatgcagcctcagccagtgggaatgcagcctggtatgatgaatcagccaatgggagtagggatgatgcaacag ccaatgtatggcgcaggaatgcaaccgatgggaacgggctatatgcagcagcctcgaccgccccaacagaacggaagcga tccttttggtgctttatgaaagcagtacaatgtggggtgaaaatggtattggcaggaactgttgacatgtga |
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| Transcript ID | pfu_aug2.0_64.1_13518.t3 |
| Definition | - |
>pfu_aug2.0_64.1_13518.t3 atgaactatggcaatgaaaggttcacacagtatcttgcatcaaataattgttcatttcaactcggcagtttcattgacaa gggaggtgtacaagggtatgacatgtcaacatttattagaagatattccaaatacttgaatgaaaaagctgtgtcatata gaagcatggcatttgacttctgtaaagtcaggagagggaaagatgacgggttattaagaacaatgaatgcagataaatta ttaaaaacattaccagcacttcaacagcagttagatgcacttttagaatttgattgtacatccaatgaattaacaaatgg agtaataaatgcctgctttctccttatgtttaaagatttaatacgactttttgcatgttacaatgatggagtcatcaatc tactagattggttaatctttagattttcaaaacaatggaacaaaaatcttcacgtttttgaaaacaagagaaatgtatta ggtgggtacttattaaagagtgtcggaatcgacaaaagtgatataccagatctggccaaggctccatctagtttgttaga tgcgttagagcagcattaccaggccctagacagtaaaaaaggggtgacaactccaggaactgcctctaagcctgcagggt ttacatcagctatcaacacaatttccaataatacaccagaaatccagatctcggaagaagagaaaaaacgtattctggat gaagaaaacgccagacttcaacaactcaaggaacaaagattaaaagaaacgggaggtcagaccacacagaatgccacgtc acaaaataatccgtttgctacgggaacgccggcagcaacaacaaatgacattttcgggtcacctacaaaatctcagcctg attcagcaagacctagtgatgacctgatgaatttaacgggaaatccgtttgtacaaaatgttcaaaatgtaatggcaatg aatgccgttactagcgccatgagcagccaaaactcctttgctacccctcagtggaacgcagccaatcccaatgtgccagc aaccactggaacgttttcgtctgaggttgattttgacaaagttttcccaaattctacaggcccaactggaaccccaggac agacgggtattaacgcgggcatgttacaaccagctctctctaccaatacccaaggttttgatgcatttggagaggtaatg aagccaaccattcagtcagacttgatggccggcaaacaaaacgagaagttgattcattcagatctagatagtagtctggc acaactggctgggaacctcaacatcaaaggctcaggatcacaggtcaaaaaacagcaacacgagtggcaaccgaaaggag agcagaaaataacgggtggtcaaaactggagtggtaaaccggctatggcatcaacgacctggacccaaccatcgtaccaa caacctatgtacaagttaaaaggcttaatcaataatgtatcaatttatggcagcgcctggtatgggatatcaaggaatga tgcagcccggtatggttggaatgcgtccaatgggtatgcagcctcagccagtgggaatgcagcctggtatgatgaatcag ccaatgggagtagggatgatgcaacagccaatgtatggcgcaggaatgcaaccgatgggaacgggctatatgcagcagcc tcgaccgccccaacagaacggaagcgatccttttggtgctttatgaaagcagtacaatgtggggtgaaaatggtattggc aggaactgttgacatgtga |
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| Transcript ID | pfu_aug2.0_64.1_13518.t4 |
| Definition | - |
>pfu_aug2.0_64.1_13518.t4 atgaactatggcaatgaaaggttcacacagtatcttgcatcaaataattgttcatttcaactcggcagtttcattgacaa gggaggtgtacaagggtatgacatgtcaacatttattagaagatattccaaatacttgaatgaaaaagctgtgtcatata gaagcatggcatttgacttctgtaaagtcaggagagggaaagatgacgggttattaagaacaatgaatgcagataaatta ttaaaaacattaccagcacttcaacagcagttagatgcacttttagaatttgattgtacatccaatgaattaacaaatgg agtaataaatgcctgctttctccttatgtttaaagatttaatacgactttttgcatgttacaatgatggagtcatcaatc tactagattggttaatctttagattttcaaaacaatggaacaaaaatcttcacgtttttgaaaacaagagaaatgtatta ggtgggtacttattaaagagtgtcggaatcgacaaaagtgatataccagatctggccaaggctccatctagtttgttaga tgcgttagagcagcattaccaggccctagacagtaaaaaaggggtgacaactccaggaactgcctctaagcctgcagggt ttacatcagctatcaacacaatttccaataatacaccagaaatccagatctcggaagaagagaaaaaacgtattctggat gaagaaaacgccagacttcaacaactcaaggatgatcactcctcagatacccttgactctgctaacaaggaacaaagatt aaaagaaacgggaggtcagaccacacagaatgccacgtcacaaaataatccgtttgctacgggaacgccggcagcaacaa caaatgacattttcgggtcacctacaaaatctcagcctgattcagcaagacctagtgatgacctgatgaatttaacggga aatccgtttgtacaaaatgttcaaaatgtaatggcaatgaatgccgttactagcgccatgagcagccaaaactcctttgc tacccctcagtggaacgcagccaatcccaatgtgccagcaaccactggaacgttttcgtctgaggttgattttgacaaag ttttcccaaattctacaggcccaactggaaccccaggacagacgggtattaacgcgggcatgttacaaccagctctctct accaatacccaagctacggaggattcttttgatccgttggattctctgtcagggggaggtaacactttcactaccagtac cgagcaggcccttggcgggatatttagtctcgacacccaacaaggaaatacagatttgtttatgagtaccccttctgggg cccctactggtgtgacccctgatctatttatgggtacttcaaccacacctgcatcagaaggggggataagcacatgtccc ttgactggcctgaacccctctacagcttacacaggctctcctatgttacctagagctagcccagctttacatcatagaag tcttacgcccacttatatggaacaagctgccccgggacgtactagtcctgcccttgtggaggacacagcctcaggttttg atgcatttggagaggtaatgaagccaaccattcagtcagacttgatggccggcaaacaaaacgagaagttgattcattca gatctagatagtagtctggcacaactggctgggaacctcaacatcaaaggctcaggatcacaggtcaaaaaacagcaaca cgagtggcaaccgaaaggagagcagaaaataacgggtggtcaaaactggagtggtaaaccggctatggcatcaacgacct ggacccaaccatcgtaccaacaacctatgtacaagttaaaaggcttaatcaataatgtatcaatttatggcagcgcctgg tatgggatatcaaggaatgatgcagcccggtatggttggaatgcgtccaatgggtatgcagcctcagccagtgggaatgc agcctggtatgatgaatcagccaatgggagtagggatgatgcaacagccaatgtatggcgcaggaatgcaaccgatggga acgggctatatgcagcagcctcgaccgccccaacagaacggaagcgatccttttggtgctttatgaaagcagtacaatgt ggggtgaaaatggtattggcaggaactgttgacatgtga |
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Protein
| Protein ID | pfu_aug2.0_64.1_13518.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_64.1_13518.t1 MNYGNERFTQYLASNNCSFQLGSFIDKGGVQGYDMSTFIRRYSKYLNEKAVSYRSMAFDFCKVRRGKDDGLLRTMNADKL LKTLPALQQQLDALLEFDCTSNELTNGVINACFLLMFKDLIRLFACYNDGVINLLDWLIFRFSKQWNKNLHVFENKRNVL GGYLLKSVGIDKSDIPDLAKAPSSLLDALEQHYQALDSKKGVTTPGTASKPAGFTSAINTISNNTPEIQISEEEKKRILD EENARLQQLKDDHSSDTLDSANKEQRLKETGGQTTQNATSQNNPFATGTPAATTNDIFGSPTKSQPDSARPSDDLMNLTG NPFVQNVQNVMAMNAVTSAMSSQNSFATPQWNAANPNVPATTGTFSSEVDFDKVFPNSTGPTGTPGQTGINAGMLQPALS TNTQGFDAFGEVMKPTIQSDLMAGKQNEKLIHSDLDSSLAQLAGNLNIKGSGSQVKKQQHEWQPKGEQKITGGQNWSGKP AMASTTWTQPSYQQPMYKLKGLINNVSIYGSAWYGISRNDAARYGWNASNGYAASASGNAAWYDESANGSRDDATANVWR RNATDGNGLYAAASTAPTERKRSFWCFMKAVQCGVKMVLAGTVDM |
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| Protein ID | pfu_aug2.0_64.1_13518.t2 |
| Definition | - |
>pfu_aug2.0_64.1_13518.t2 MNYGNERFTQYLASNNCSFQLGSFIDKGGVQGYDMSTFIRRYSKYLNEKAVSYRSMAFDFCKVRRGKDDGLLRTMNADKL LKTLPALQQQLDALLEFDCTSNELTNGVINACFLLMFKDLIRLFACYNDGVINLLDWLIFRFSKQWNKNLHVFENKRNVL GGYLLKSVGIDKSDIPDLAKAPSSLLDALEQHYQALDSKKGVTTPGTASKPAGFTSAINTISNNTPEIQISEEEKKRILD EENARLQQLKDDHSSDTLDSANKEQRLKETGGQTTQNATSQNNPFATGTPAATTNDIFGSPTKSQPDSARPSDDLMNLTG NPFVQNVQNVMAMNAVTSAMSSQNSFATPQWNAANPNVPATTGTFSSEVDFDKVFPNSTGPTGFDAFGEVMKPTIQSDLM AGKQNEKLIHSDLDSSLAQLAGNLNIKGSGSQVKKQQHEWQPKGEQKITGGQNWSGKPAMASTTWTQPSYQQPMYKLKGL INNVSIYGSAWYGISRNDAARYGWNASNGYAASASGNAAWYDESANGSRDDATANVWRRNATDGNGLYAAASTAPTERKR SFWCFMKAVQCGVKMVLAGTVDM |
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| Protein ID | pfu_aug2.0_64.1_13518.t3 |
| Definition | - |
>pfu_aug2.0_64.1_13518.t3 MNYGNERFTQYLASNNCSFQLGSFIDKGGVQGYDMSTFIRRYSKYLNEKAVSYRSMAFDFCKVRRGKDDGLLRTMNADKL LKTLPALQQQLDALLEFDCTSNELTNGVINACFLLMFKDLIRLFACYNDGVINLLDWLIFRFSKQWNKNLHVFENKRNVL GGYLLKSVGIDKSDIPDLAKAPSSLLDALEQHYQALDSKKGVTTPGTASKPAGFTSAINTISNNTPEIQISEEEKKRILD EENARLQQLKEQRLKETGGQTTQNATSQNNPFATGTPAATTNDIFGSPTKSQPDSARPSDDLMNLTGNPFVQNVQNVMAM NAVTSAMSSQNSFATPQWNAANPNVPATTGTFSSEVDFDKVFPNSTGPTGTPGQTGINAGMLQPALSTNTQGFDAFGEVM KPTIQSDLMAGKQNEKLIHSDLDSSLAQLAGNLNIKGSGSQVKKQQHEWQPKGEQKITGGQNWSGKPAMASTTWTQPSYQ QPMYKLKGLINNVSIYGSAWYGISRNDAARYGWNASNGYAASASGNAAWYDESANGSRDDATANVWRRNATDGNGLYAAA STAPTERKRSFWCFMKAVQCGVKMVLAGTVDM |
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| Protein ID | pfu_aug2.0_64.1_13518.t4 |
| Definition | - |
>pfu_aug2.0_64.1_13518.t4 MNYGNERFTQYLASNNCSFQLGSFIDKGGVQGYDMSTFIRRYSKYLNEKAVSYRSMAFDFCKVRRGKDDGLLRTMNADKL LKTLPALQQQLDALLEFDCTSNELTNGVINACFLLMFKDLIRLFACYNDGVINLLDWLIFRFSKQWNKNLHVFENKRNVL GGYLLKSVGIDKSDIPDLAKAPSSLLDALEQHYQALDSKKGVTTPGTASKPAGFTSAINTISNNTPEIQISEEEKKRILD EENARLQQLKDDHSSDTLDSANKEQRLKETGGQTTQNATSQNNPFATGTPAATTNDIFGSPTKSQPDSARPSDDLMNLTG NPFVQNVQNVMAMNAVTSAMSSQNSFATPQWNAANPNVPATTGTFSSEVDFDKVFPNSTGPTGTPGQTGINAGMLQPALS TNTQATEDSFDPLDSLSGGGNTFTTSTEQALGGIFSLDTQQGNTDLFMSTPSGAPTGVTPDLFMGTSTTPASEGGISTCP LTGLNPSTAYTGSPMLPRASPALHHRSLTPTYMEQAAPGRTSPALVEDTASGFDAFGEVMKPTIQSDLMAGKQNEKLIHS DLDSSLAQLAGNLNIKGSGSQVKKQQHEWQPKGEQKITGGQNWSGKPAMASTTWTQPSYQQPMYKLKGLINNVSIYGSAW YGISRNDAARYGWNASNGYAASASGNAAWYDESANGSRDDATANVWRRNATDGNGLYAAASTAPTERKRSFWCFMKAVQC GVKMVLAGTVDM |
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