Gene
| Gene Model ID | pfu_aug2.0_64.1_13519 |
|---|---|
| Locus | scaffold64.1 : 289950 ... 296799 : - |
| To GenomeBrowser | scaffold64.1:289950..296799 |
| Genes list of scaffold | scaffold64.1 |
| Synonym | pfu_aug1.0_5668.1_31012 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_64.1_13519.t1 | 1 | 1 | UPF0240 | 3 | 135 | 2.5e-12 | 46.8 | 1.7e-16 | 2.5e-12 | 46.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_64.1_13519.t1 | gi|350404960|ref|XP_003487273.1| | PREDICTED: protein NDUFAF4 homolog [Bombus impatiens] | 2.0e-11 |
| pfu_aug2.0_64.1_13519.t1 | gi|380011171|ref|XP_003689684.1| | 5.0e-11 | |
| pfu_aug2.0_64.1_13519.t1 | gi|340713335|ref|XP_003395200.1| | PREDICTED: protein NDUFAF4 homolog [Bombus terrestris] | 1.0e-09 |
| pfu_aug2.0_64.1_13519.t1 | gi|571523160|ref|XP_006562036.1| | PREDICTED: protein NDUFAF4 homolog isoform X1 [Apis mellifera] | 5.0e-09 |
| pfu_aug2.0_64.1_13519.t1 | gi|665802357|ref|XP_008549229.1| | PREDICTED: protein NDUFAF4 homolog [Microplitis demolitor] | 3.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_64.1_13519.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_64.1_13519.t1 atggagacgggaaagcctcagccggcgccaaaacataagtctgctaaagctaagaaattatacgatgatgcttggagtaa tcctgatgaatccctgctgcagaaagatgagggtttagcatcaaaactgaagacactggaagtgaaaactattgacccac atttggagaagtccagtacaaagagacccttgccggagaagagacctcagaaagaagaacttctgttcgggattcctacc cctaaaacagggaagggtaaaatcaacattaaggaagtcatggacatactctctggtactgaaagcgacctgaaaggttt ctctgtggataagatttcaaagaaatacaacttagacccgatcaaagtgcaacagattctaacaaactatggattgttta aaacgctagatttccgtgatccaaaacagaaaatagacagggaaacgcaagaatctcaggaacatttatttaaagcagtg ccagctcccaagaaaacgaagcaagataacaatgacaattttgcaggtgcaggtcttgatcagacaaaaagctcctga |
|
Protein
| Protein ID | pfu_aug2.0_64.1_13519.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_64.1_13519.t1 METGKPQPAPKHKSAKAKKLYDDAWSNPDESLLQKDEGLASKLKTLEVKTIDPHLEKSSTKRPLPEKRPQKEELLFGIPT PKTGKGKINIKEVMDILSGTESDLKGFSVDKISKKYNLDPIKVQQILTNYGLFKTLDFRDPKQKIDRETQESQEHLFKAV PAPKKTKQDNNDNFAGAGLDQTKSS |
|