Gene
| Gene Model ID | pfu_aug2.0_64.1_13524 |
|---|---|
| Locus | scaffold64.1 : 432108 ... 438773 : + |
| To GenomeBrowser | scaffold64.1:432108..438773 |
| Genes list of scaffold | scaffold64.1 |
| Synonym | pfu_aug1.0_11844.1_10377 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| translocator protein | GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_64.1_13524.t1 | 1 | 1 | TspO_MBR | 9 | 156 | 0.0 | 188.3 | 0.0 | 0.0 | 188.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_64.1_13524.t1 | gi|676481088|ref|XP_009062264.1| | hypothetical protein LOTGIDRAFT_210696 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_64.1_13524.t1 | gi|524910648|ref|XP_005110199.1| | PREDICTED: translocator protein-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_64.1_13524.t1 | gi|524910646|ref|XP_005110198.1| | PREDICTED: translocator protein-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_64.1_13524.t1 | gi|524910644|ref|XP_005110197.1| | PREDICTED: translocator protein-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_64.1_13524.t1 | gi|147906451|ref|NP_001080225.1| | translocator protein (18kDa) [Xenopus laevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_64.1_13524.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_64.1_13524.t1 atgtctgactatgtagagcctgtggtagcctccttaattccacatataggaggcatactgggatcgtttgtgtctagatc taacataaagacttggtatgagcatctagagcgtccttcatggcgtcccccaaactggatatttggcccagtatggactg ccctgtacacaggtatgggatacgcctcatacttggtatacagagacggaggcggcttacagggtgatgccgccatgcca ctggcactatacggcacacagctggcacttaactgggcgtggtcacccatcttctttggtgctcataaacttggattggc caccatagagattgtagggttgtggggttccattgtggccaccactgtcgcattccacccgatcaatgctacggcttcct accttatgatgccctacctagcctgggtgacctttgccacggccttgaccttcaggatttggcagttaaacaaggacaaa aaggactaa |
|
Protein
| Protein ID | pfu_aug2.0_64.1_13524.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_64.1_13524.t1 MSDYVEPVVASLIPHIGGILGSFVSRSNIKTWYEHLERPSWRPPNWIFGPVWTALYTGMGYASYLVYRDGGGLQGDAAMP LALYGTQLALNWAWSPIFFGAHKLGLATIEIVGLWGSIVATTVAFHPINATASYLMMPYLAWVTFATALTFRIWQLNKDK KD |
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