Gene
| Gene Model ID | pfu_aug2.0_64.1_13525 |
|---|---|
| Locus | scaffold64.1 : 438855 ... 453267 : - |
| To GenomeBrowser | scaffold64.1:438855..453267 |
| Genes list of scaffold | scaffold64.1 |
| Synonym | pfu_aug1.0_11844.1_10376 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_64.1_13525.t1 | 6 | 1 | WD40 | 242 | 280 | 1.60028e-42 | 141.8 | 2.9e-12 | 1.4e-08 | 34.2 |
| pfu_aug2.0_64.1_13525.t1 | 6 | 2 | WD40 | 286 | 323 | 1.60028e-42 | 141.8 | 5.7e-11 | 2.8e-07 | 30.1 |
| pfu_aug2.0_64.1_13525.t1 | 6 | 3 | WD40 | 328 | 367 | 1.60028e-42 | 141.8 | 8.4e-06 | 0.041 | 13.7 |
| pfu_aug2.0_64.1_13525.t1 | 6 | 4 | WD40 | 371 | 409 | 1.60028e-42 | 141.8 | 3.0e-09 | 1.5e-05 | 24.6 |
| pfu_aug2.0_64.1_13525.t1 | 6 | 5 | WD40 | 430 | 453 | 1.60028e-42 | 141.8 | 9.1e-09 | 4.5e-05 | 23.1 |
| pfu_aug2.0_64.1_13525.t1 | 6 | 6 | WD40 | 460 | 496 | 1.60028e-42 | 141.8 | 5.1e-09 | 2.5e-05 | 23.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_64.1_13525.t1 | gi|676474858|ref|XP_009060280.1| | hypothetical protein LOTGIDRAFT_205766 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_64.1_13525.t1 | gi|524898964|ref|XP_005105924.1| | PREDICTED: pre-mRNA-processing factor 17-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_64.1_13525.t1 | gi|390352110|ref|XP_789449.2| | 0.0 | |
| pfu_aug2.0_64.1_13525.t1 | gi|759038300|ref|XP_011351674.1| | PREDICTED: pre-mRNA-processing factor 17 [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_64.1_13525.t1 | gi|746870590|ref|XP_011066485.1| | PREDICTED: pre-mRNA-processing factor 17 [Acromyrmex echinatior] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_64.1_13525.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_64.1_13525.t1 atgttagcacttcaagattacaacagtgataaaagtgattctgaagatggaaacgacgataattcagaagatttaactgc acacttaaagccgctttcaaattccagggataaaataagtacaattgcactcaattcagctccaacagtcataactaagg atgatgttgaccttgttaaaccagtggatcctaaaacaaaggaagtcatgtacaatccaaagtatgatgaaatgtatgca cctcaggtagggccttcaaatccctataaaacccagcagatgttatcaacaagaaatactctgactggttacgctgaggc tgctcacataagtagctttgagtttgaaaatcagagacgcacatttcatagttatggtaaatcagtatttgaagctataa cgaagagacctgaagataagaggaaaagacagaggaatgacaatcctggtgacatcgagggttatctgggaccatggggg aaatttgtggatgaaaaaacagtcatgaaaccaaatgaggaagaaaagaaggaattagatgaaatcttggcaaagagaag taaaacgggtaaacagacggaggagaaaactgccgaggaaaagacaatattacacatcaaagatgcgtatgactaccagg gtcgttcatatttacacataccccaggacgtgggtgtcaaccttaagtcagattcacctccagaaaaatgtttcctacca aagaaacagattcacacatgggcggggcatagtaaaggcgtgtcagccatacggtggttcccgaaatctgctcatctctt actatcctgcagtatggattgtaaaataaagatctgggaggtatacaatgagaggagatgtataaggacgtataacggtc acaaacaagctgtacgagatgctacgtttaacaactctggtacagaattcttaagttgtgcctatgatagatacattaaa ctctgggacacagaaacaggagagtgtaaatctcgttttaccagccgtaaagtgccgtactgtgtaaagtaccacccgga ggaggataagcaacatttgtttgtggccggtacctcggacaagaaaatcgtttgttgggacataaggtcaggagagattg tacaggaatatgacagacatttaggtgccgttaatacaatcacgttcgtagatcagaacaggagatttgtttccacgtct gacgataaaagtctacgtgtttgggaatgatttaaatatatgaggaagaaagtcttcactggacatatggttgcaggtta cgcatgtggagtggacttctcaccggacatgagttacttgatatcaggagatgcagatgggaagttatatatctgggact ggaagacaacaaaactttattctaaattcaaagctcatgatgacgtgtgtgtcggtgttttatggcatccacatgagaca tcaaaggtggcaacatgtggctgggacggtgttatcaaatactgggactga |
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Protein
| Protein ID | pfu_aug2.0_64.1_13525.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_64.1_13525.t1 MLALQDYNSDKSDSEDGNDDNSEDLTAHLKPLSNSRDKISTIALNSAPTVITKDDVDLVKPVDPKTKEVMYNPKYDEMYA PQVGPSNPYKTQQMLSTRNTLTGYAEAAHISSFEFENQRRTFHSYGKSVFEAITKRPEDKRKRQRNDNPGDIEGYLGPWG KFVDEKTVMKPNEEEKKELDEILAKRSKTGKQTEEKTAEEKTILHIKDAYDYQGRSYLHIPQDVGVNLKSDSPPEKCFLP KKQIHTWAGHSKGVSAIRWFPKSAHLLLSCSMDCKIKIWEVYNERRCIRTYNGHKQAVRDATFNNSGTEFLSCAYDRYIK LWDTETGECKSRFTSRKVPYCVKYHPEEDKQHLFVAGTSDKKIVCWDIRSGEIVQEYDRHLGAVNTITFVDQNRRFVSTS DDKSLRVWEXFKYMRKKVFTGHMVAGYACGVDFSPDMSYLISGDADGKLYIWDWKTTKLYSKFKAHDDVCVGVLWHPHET SKVATCGWDGVIKYWD |
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