Gene
| Gene Model ID | pfu_aug2.0_642.1_07752 |
|---|---|
| Locus | scaffold642.1 : 32856 ... 77360 : + |
| To GenomeBrowser | scaffold642.1:32856..77360 |
| Genes list of scaffold | scaffold642.1 |
| Synonym | pfu_aug1.0_11879.1_10387 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_642.1_07752.t4 | 1 | 1 | TMC | 499 | 609 | 2.4e-38 | 130.9 | 3.09995e-41 | 7.8e-38 | 129.3 |
Transcript
| Transcript ID | pfu_aug2.0_642.1_07752.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_642.1_07752.t1 atgaagtacatttttggacataataaatttatgaatcgcaagcgatataagtaccctaccggcatacaagaaatctgctt tggaatatccgagaaatcagtgtacatagtaaaacaagaactacaggaccattgggagcagcgacgacagggggtcgcca agagcaaggtccacgccttcatcgccttattaccaagtcggcaatctttcgcaaacgtcggcacaaaaatggcgtcaagt agagtgcgcaagcgctcccggaagcacaataagatacacccggatacagagcggaaggctagcgatcccgatcttttaga gctagagaaacatggaatagatgtcagcatcgtagaagacgaggaggacaaatggaaaatactacagacgataaaaggac taccctgctctctgtctacaaaaagacgattcagagacaagttgtctgaggccccagccaagaggaacactggatgctgt ggggataccaagcagacaaacagacgattcaaagcatggaggaaagaaatggggtacaaattagagctttggggttcagc tctcaaaaagatagaaggtcaccagggtacaggagtcgtatcgtacttcgtctttctccgctggttgttctttctgaaca ttgccatctttgtcttgatgttcctgtttgttgtcataccgtacctagcattcggatccctggggtacacgtcagaagtt ataggtgatggctcagtgtcaggtgtggacatctccaaggagggcacctgctcaccgctttacactgtaaatgtgtcctc ctcagcgagtactctcatacaagacttcttacaaggatcgggctggatggagaaaacagcgttgtttatgggtttttacg acgcccaggatttatacatagggagtacatccagtaactacatactacctctggcgtattttatagtcacacttattgta ctgctgctgagcctcatcacgatggcaagatatactgtaggtagttttcacgaagaaatagaggatcagaatgaccacac acagtacagtaacaaagtgtttggtgcctgggattttgcacttagtgaagaaggaccagcacagctaaaaaaacagagtc tttacaacgatatcataggcgaactccgggaacaaaaatatatggaggaaaggaacaacatgtcgtcccagaagaagtgc gggttatatactatcagagtgcttatttttatcctggttctggcactgcttggtgggtctggagctgccatctacttcgt cacagcttacacgtctgatttcttatccagtggtaagtcccagacagaggataattttgtggttttactagtggagtttt taccgtctctgactatcactgccctcaatgctgtcattcctataatatttggacttgtaatcaaagctgaagactataca ccggccttcaccatacagtatacacttataaggacggtatttttgcgtttggcgtccctggcagttttagtggctaccct gtatcagaccatatcatgtacagacaaagatacacagtgtaatgtaggtcaaggaagctgtgattcatacaggtgttggg agacatatgttggacagaacttctacaaactggctgttctgaacgctctagtgcacattgccgtcacattggcgtatgaa ctgccaagaaaattactgacaacaaaatgtagctgtggtatttgtcaaaagattggacctgctgaatttgacatacctaa aaacgtattggatctggtgtatacacaagcactgtgttggataggatttttctatgcacctctgcttccaatactgacag tcgctgacctcttcttcctgttttacctcaaatatttgtcagccatgtataataccacgcctccggagcgcccttataaa gcttccaagtccaacaatttctttatgatagtgctgatggtcaccttcttcttctgctgtgttcctgtgggataccccat ggtctcacttgagccttcaaagggatgtggaccattccgtatatacaccaagatgagcgtcattgtagatgcaacaatat caaacttcccgtccactatacgtaccatactaagcttggtgacgtcagcttctgttattatctgccttgttgttctctta tgtttgataatttactactgtgctgctcgatcatctgctaaatccaaagcagtaaacttgatgaaggaacaacttatctt ggaaggaaaagacaagcagttcctgctcaacagaatttatgaattaactggtgaaaaaccaggagcgaagaaagtagcca atggaaacgtaaaaactacagcgtctaccattgatgagactaagaaagggtatcctgatgaaaatgggattgatgaaata tgggcataa |
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| Transcript ID | pfu_aug2.0_642.1_07752.t2 |
| Definition | - |
>pfu_aug2.0_642.1_07752.t2 atgaagtacatttttggacataataaatttatgaatcgcaagcgatataagtaccctaccggcatacaagaaatctgctt tggaatatccgagaaatcagtgtacatagtaaaacaagaactacaggaccattgggagcagcgacgacagggggtcgcca agagcaaggtccacgccttcatcgccttattaccaagtcggcaatctttcgcaaacgtcggcacaaaaatggcgtcaagt agagtgcgcaagcgctcccggaagcacaataagatacacccggatacagagcggaaggctagcgatcccgatcttttaga gctagagaaacatggaatagatgtcagcatcgtagaagacgaggaggacaaatggaaaatactacagacgataaaaggac taccctgctctctgtctacaaaaagacgattcagagacaagttgtctgaggccccagccaagaggaacactggatgctgt ggggataccaagcagacaaacagacgattcaaagcatggaggaaagaaatggggtacaaattagagctttggggttcagc tctcaaaaagatagaaggtcaccagggtacaggagtcgtatcgtacttcgtctttctccgctggttgttctttctgaaca ttgccatctttgtcttgatgttcctgtttgttgtcataccgtacctagcattcggatccctggggtacacgtcagaagtt ataggtgatggctcagtgtcaggtgtggacatctccaaggagggcacctgctcaccgctttacactgtaaatgtgtcctc ctcagcgagtactctcatacaagacttcttacaaggatcgggctggatggagaaaacagcgttgtttatgggtttttacg acgcccaggatttatacatagggagtacatccagtaactacatactacctctggcgtattttatagtcacacttattgta ctgctgctgagcctcatcacgatggcaagatatactgtaggtagttttcacgaagaaatagaggatcagaatgaccacac acagtacagtaacaaagtgtttggtgcctgggattttgcacttagtgaagaaggaccagcacagctaaaaaaacagagtc tttacaacgatatcataggcgaactccgggaacaaaaatatatggaggaaaggaacaacatgtcgtcccagaagaagtgc gggttatatactatcagagtgcttatttttatcctggttctggcactgcttggtgggtctggagctgccatctacttcgt cacagcttacacgtctgatttcttatccagtggtaagtcccagacagaggataattttgtggttttactagtggagtttt taccgtctctgactatcactgccctcaatgctgtcattcctataatatttggacttgtaatcaaagctgaagactataca ccggccttcaccatacagtatacacttataaggacggtatttttgcgtttggcgtccctggcagttttagtggctaccct gtatcagaccatatcatgtacagacaaagatacacagtgtaatgtaggtcaaggaagctgtgattcatacaggtgttggg agacatatgttggacagaacttctacaaactggctgttctgaacgctctagtgcacattgccgtcacattggcgtatgaa ctgccaagaaaattactgacaacaaaatgtagctgtggtatttgtcaaaagattggacctgctgaatttgacatacctaa aaacgtattggatctggtgtatacacaagcactgtgttggataggatttttctatgcacctctgcttccaatactgacag tcgctgacctcttcttcctgttttacctcaaatatttgtcagccatgtataataccacgcctccggagcgcccttataaa gcttccaagtccaacaatttctttatgatagtgctgatggtcaccttcttcttctgctgtgttcctgtgggataccccat ggtctcacttgagccttcaaagggatgtggaccattccgtatatacaccaagatgagcgtcattgtagatgcaacaatat caaacttcccgtccactatacgtaccatactaagcttggtgacgtcagcttctgttattatctgccttgttgttctctta tgtttgataatttactactgtgctgctcgatcatctgctaaatccaaagcagtaaacttgatgaaggaacaacttatctt ggaaggaaaagacaagcagttcctgctcaacagaatttatgaattaactggtgaaaaaccaggagcgaagaaagtagcca atggaaacgtaaaaactacagcgtctaccattgatgagactaagaaagggtatcctgatgaaaatgggctgaagacttta catgtaaaagaacaagttcctgacgctgtggtatatgacatccccgacaatgaattcaatgattcaataaccaccaaaga cacagccccactcaccaaggaaacatcgtttgtagattggggagacggcgatacggaggaaaacaacaactcaagggcaa ggtcaatagctaccacagggaaagtcggcattgaggatttttaa |
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| Transcript ID | pfu_aug2.0_642.1_07752.t3 |
| Definition | - |
>pfu_aug2.0_642.1_07752.t3 atgtctaaatcagacgaagaactacaggaccattgggagcagcgacgacagggggtcgccaagagcaaggtccacgcctt catcgccttattaccaagtcggcaatctttcgcaaacgtcggcacaaaaatggcgtcaagtagagtgcgcaagcgctccc ggaagcacaataagatacacccggatacagagcggaaggctagcgatcccgatcttttagagctagagaaacatggaata gatgtcagcatcgtagaagacgaggaggacaaatggaaaatactacagacgataaaaggactaccctgctctctgtctac aaaaagacgattcagagacaagttgtctgaggccccagccaagaggaacactggatgctgtggggataccaagcagacaa acagacgattcaaagcatggaggaaagaaatggggtacaaattagagctttggggttcagctctcaaaaagatagaaggt caccagggtacaggagtcgtatcgtacttcgtctttctccgctggttgttctttctgaacattgccatctttgtcttgat gttcctgtttgttgtcataccgtacctagcattcggatccctggggtacacgtcagaagttataggtgatggctcagtgt caggtgtggacatctccaaggagggcacctgctcaccgctttacactgtaaatgtgtcctcctcagcgagtactctcata caagacttcttacaaggatcgggctggatggagaaaacagcgttgtttatgggtttttacgacgcccaggatttatacat agggagtacatccagtaactacatactacctctggcgtattttatagtcacacttattgtactgctgctgagcctcatca cgatggcaagatatactgtaggtagttttcacgaagaaatagaggatcagaatgaccacacacagtacagtaacaaagtg tttggtgcctgggattttgcacttagtgaagaaggaccagcacagctaaaaaaacagagtctttacaacgatatcatagg cgaactccgggaacaaaaatatatggaggaaaggaacaacatgtcgtcccagaagaagtgcgggttatatactatcagag tgcttatttttatcctggttctggcactgcttggtgggtctggagctgccatctacttcgtcacagcttacacgtctgat ttcttatccagtggtaagtcccagacagaggataattttgtggttttactagtggagtttttaccgtctctgactatcac tgccctcaatgctgtcattcctataatatttggacttgtaatcaaagctgaagactatacaccggccttcaccatacagt atacacttataaggacggtatttttgcgtttggcgtccctggcagttttagtggctaccctgtatcagaccatatcatgt acagacaaagatacacagtgtaatgtaggtcaaggaagctgtgattcatacaggtgttgggagacatatgttggacagaa cttctacaaactggctgttctgaacgctctagtgcacattgccgtcacattggcgtatgaactgccaagaaaattactga caacaaaatgtagctgtggtatttgtcaaaagattggacctgctgaatttgacatacctaaaaacgtattggatctggtg tatacacaagcactgtgttggataggatttttctatgcacctctgcttccaatactgacagtcgctgacctcttcttcct gttttacctcaaatatttgtcagccatgtataataccacgcctccggagcgcccttataaagcttccaagtccaacaatt tctttatgatagtgctgatggtcaccttcttcttctgctgtgttcctgtgggataccccatggtctcacttgagccttca aagggatgtggaccattccgtatatacaccaagatgagcgtcattgtagatgcaacaatatcaaacttcccgtccactat acgtaccatactaagcttggtgacgtcagcttctgttattatctgccttgttgttctcttatgtttgataatttactact gtgctgctcgatcatctgctaaatccaaagcagtaaacttgatgaaggaacaacttatcttggaaggaaaagacaagcag ttcctgctcaacagaatttatgaattaactggtgaaaaaccaggagcgaagaaagtagccaatggaaacgtaaaaactac agcgtctaccattgatgagactaagaaagggtatcctgatgaaaatgggattgatgaaatatgggcataa |
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| Transcript ID | pfu_aug2.0_642.1_07752.t4 |
| Definition | - |
>pfu_aug2.0_642.1_07752.t4 atgtctaaatcagacgaagaactacaggaccattgggagcagcgacgacagggggtcgccaagagcaaggtccacgcctt catcgccttattaccaagtcggcaatctttcgcaaacgtcggcacaaaaatggcgtcaagtagagtgcgcaagcgctccc ggaagcacaataagatacacccggatacagagcggaaggctagcgatcccgatcttttagagctagagaaacatggaata gatgtcagcatcgtagaagacgaggaggacaaatggaaaatactacagacgataaaaggactaccctgctctctgtctac aaaaagacgattcagagacaagttgtctgaggccccagccaagaggaacactggatgctgtggggataccaagcagacaa acagacgattcaaagcatggaggaaagaaatggggtacaaattagagctttggggttcagctctcaaaaagatagaaggt caccagggtacaggagtcgtatcgtacttcgtctttctccgctggttgttctttctgaacattgccatctttgtcttgat gttcctgtttgttgtcataccgtacctagcattcggatccctggggtacacgtcagaagttataggtgatggctcagtgt caggtgtggacatctccaaggagggcacctgctcaccgctttacactgtaaatgtgtcctcctcagcgagtactctcata caagacttcttacaaggatcgggctggatggagaaaacagcgttgtttatgggtttttacgacgcccaggatttatacat agggagtacatccagtaactacatactacctctggcgtattttatagtcacacttattgtactgctgctgagcctcatca cgatggcaagatatactgtaggtagttttcacgaagaaatagaggatcagaatgaccacacacagtacagtaacaaagtg tttggtgcctgggattttgcacttagtgaagaaggaccagcacagctaaaaaaacagagtctttacaacgatatcatagg cgaactccgggaacaaaaatatatggaggaaaggaacaacatgtcgtcccagaagaagtgcgggttatatactatcagag tgcttatttttatcctggttctggcactgcttggtgggtctggagctgccatctacttcgtcacagcttacacgtctgat ttcttatccagtggtaagtcccagacagaggataattttgtggttttactagtggagtttttaccgtctctgactatcac tgccctcaatgctgtcattcctataatatttggacttgtaatcaaagctgaagactatacaccggccttcaccatacagt atacacttataaggacggtatttttgcgtttggcgtccctggcagttttagtggctaccctgtatcagaccatatcatgt acagacaaagatacacagtgtaatgtaggtcaaggaagctgtgattcatacaggtgttgggagacatatgttggacagaa cttctacaaactggctgttctgaacgctctagtgcacattgccgtcacattggcgtatgaactgccaagaaaattactga caacaaaatgtagctgtggtatttgtcaaaagattggacctgctgaatttgacatacctaaaaacgtattggatctggtg tatacacaagcactgtgttggataggatttttctatgcacctctgcttccaatactgacagtcgctgacctcttcttcct gttttacctcaaatatttgtcagccatgtataataccacgcctccggagcgcccttataaagcttccaagtccaacaatt tctttatgatagtgctgatggtcaccttcttcttctgctgtgttcctgtgggataccccatggtctcacttgagccttca aagggatgtggaccattccgtatatacaccaagatgagcgtcattgtagatgcaacaatatcaaacttcccgtccactat acgtaccatactaagcttggtgacgtcagcttctgttattatctgccttgttgttctcttatgtttgataatttactact gtgctgctcgatcatctgctaaatccaaagcagtaaacttgatgaaggaacaacttatcttggaaggaaaagacaagcag ttcctgctcaacagaatttatgaattaactggtgaaaaaccaggagcgaagaaagtagccaatggaaacgtaaaaactac agcgtctaccattgatgagactaagaaagggtatcctgatgaaaatgggctgaagactttacatgtaaaagaacaagttc ctgacgctgtggtatatgacatccccgacaatgaattcaatgattcaataaccaccaaagacacagccccactcaccaag gaaacatcgtttgtagattggggagacggcgatacggaggaaaacaacaactcaagggcaaggtcaatagctaccacagg gaaagtcggcattgaggatttttaa |
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Protein
| Protein ID | pfu_aug2.0_642.1_07752.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_642.1_07752.t1 MKYIFGHNKFMNRKRYKYPTGIQEICFGISEKSVYIVKQELQDHWEQRRQGVAKSKVHAFIALLPSRQSFANVGTKMASS RVRKRSRKHNKIHPDTERKASDPDLLELEKHGIDVSIVEDEEDKWKILQTIKGLPCSLSTKRRFRDKLSEAPAKRNTGCC GDTKQTNRRFKAWRKEMGYKLELWGSALKKIEGHQGTGVVSYFVFLRWLFFLNIAIFVLMFLFVVIPYLAFGSLGYTSEV IGDGSVSGVDISKEGTCSPLYTVNVSSSASTLIQDFLQGSGWMEKTALFMGFYDAQDLYIGSTSSNYILPLAYFIVTLIV LLLSLITMARYTVGSFHEEIEDQNDHTQYSNKVFGAWDFALSEEGPAQLKKQSLYNDIIGELREQKYMEERNNMSSQKKC GLYTIRVLIFILVLALLGGSGAAIYFVTAYTSDFLSSGKSQTEDNFVVLLVEFLPSLTITALNAVIPIIFGLVIKAEDYT PAFTIQYTLIRTVFLRLASLAVLVATLYQTISCTDKDTQCNVGQGSCDSYRCWETYVGQNFYKLAVLNALVHIAVTLAYE LPRKLLTTKCSCGICQKIGPAEFDIPKNVLDLVYTQALCWIGFFYAPLLPILTVADLFFLFYLKYLSAMYNTTPPERPYK ASKSNNFFMIVLMVTFFFCCVPVGYPMVSLEPSKGCGPFRIYTKMSVIVDATISNFPSTIRTILSLVTSASVIICLVVLL CLIIYYCAARSSAKSKAVNLMKEQLILEGKDKQFLLNRIYELTGEKPGAKKVANGNVKTTASTIDETKKGYPDENGIDEI WA |
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| Protein ID | pfu_aug2.0_642.1_07752.t2 |
| Definition | - |
>pfu_aug2.0_642.1_07752.t2 MKYIFGHNKFMNRKRYKYPTGIQEICFGISEKSVYIVKQELQDHWEQRRQGVAKSKVHAFIALLPSRQSFANVGTKMASS RVRKRSRKHNKIHPDTERKASDPDLLELEKHGIDVSIVEDEEDKWKILQTIKGLPCSLSTKRRFRDKLSEAPAKRNTGCC GDTKQTNRRFKAWRKEMGYKLELWGSALKKIEGHQGTGVVSYFVFLRWLFFLNIAIFVLMFLFVVIPYLAFGSLGYTSEV IGDGSVSGVDISKEGTCSPLYTVNVSSSASTLIQDFLQGSGWMEKTALFMGFYDAQDLYIGSTSSNYILPLAYFIVTLIV LLLSLITMARYTVGSFHEEIEDQNDHTQYSNKVFGAWDFALSEEGPAQLKKQSLYNDIIGELREQKYMEERNNMSSQKKC GLYTIRVLIFILVLALLGGSGAAIYFVTAYTSDFLSSGKSQTEDNFVVLLVEFLPSLTITALNAVIPIIFGLVIKAEDYT PAFTIQYTLIRTVFLRLASLAVLVATLYQTISCTDKDTQCNVGQGSCDSYRCWETYVGQNFYKLAVLNALVHIAVTLAYE LPRKLLTTKCSCGICQKIGPAEFDIPKNVLDLVYTQALCWIGFFYAPLLPILTVADLFFLFYLKYLSAMYNTTPPERPYK ASKSNNFFMIVLMVTFFFCCVPVGYPMVSLEPSKGCGPFRIYTKMSVIVDATISNFPSTIRTILSLVTSASVIICLVVLL CLIIYYCAARSSAKSKAVNLMKEQLILEGKDKQFLLNRIYELTGEKPGAKKVANGNVKTTASTIDETKKGYPDENGLKTL HVKEQVPDAVVYDIPDNEFNDSITTKDTAPLTKETSFVDWGDGDTEENNNSRARSIATTGKVGIEDF |
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| Protein ID | pfu_aug2.0_642.1_07752.t3 |
| Definition | - |
>pfu_aug2.0_642.1_07752.t3 MSKSDEELQDHWEQRRQGVAKSKVHAFIALLPSRQSFANVGTKMASSRVRKRSRKHNKIHPDTERKASDPDLLELEKHGI DVSIVEDEEDKWKILQTIKGLPCSLSTKRRFRDKLSEAPAKRNTGCCGDTKQTNRRFKAWRKEMGYKLELWGSALKKIEG HQGTGVVSYFVFLRWLFFLNIAIFVLMFLFVVIPYLAFGSLGYTSEVIGDGSVSGVDISKEGTCSPLYTVNVSSSASTLI QDFLQGSGWMEKTALFMGFYDAQDLYIGSTSSNYILPLAYFIVTLIVLLLSLITMARYTVGSFHEEIEDQNDHTQYSNKV FGAWDFALSEEGPAQLKKQSLYNDIIGELREQKYMEERNNMSSQKKCGLYTIRVLIFILVLALLGGSGAAIYFVTAYTSD FLSSGKSQTEDNFVVLLVEFLPSLTITALNAVIPIIFGLVIKAEDYTPAFTIQYTLIRTVFLRLASLAVLVATLYQTISC TDKDTQCNVGQGSCDSYRCWETYVGQNFYKLAVLNALVHIAVTLAYELPRKLLTTKCSCGICQKIGPAEFDIPKNVLDLV YTQALCWIGFFYAPLLPILTVADLFFLFYLKYLSAMYNTTPPERPYKASKSNNFFMIVLMVTFFFCCVPVGYPMVSLEPS KGCGPFRIYTKMSVIVDATISNFPSTIRTILSLVTSASVIICLVVLLCLIIYYCAARSSAKSKAVNLMKEQLILEGKDKQ FLLNRIYELTGEKPGAKKVANGNVKTTASTIDETKKGYPDENGIDEIWA |
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| Protein ID | pfu_aug2.0_642.1_07752.t4 |
| Definition | - |
>pfu_aug2.0_642.1_07752.t4 MSKSDEELQDHWEQRRQGVAKSKVHAFIALLPSRQSFANVGTKMASSRVRKRSRKHNKIHPDTERKASDPDLLELEKHGI DVSIVEDEEDKWKILQTIKGLPCSLSTKRRFRDKLSEAPAKRNTGCCGDTKQTNRRFKAWRKEMGYKLELWGSALKKIEG HQGTGVVSYFVFLRWLFFLNIAIFVLMFLFVVIPYLAFGSLGYTSEVIGDGSVSGVDISKEGTCSPLYTVNVSSSASTLI QDFLQGSGWMEKTALFMGFYDAQDLYIGSTSSNYILPLAYFIVTLIVLLLSLITMARYTVGSFHEEIEDQNDHTQYSNKV FGAWDFALSEEGPAQLKKQSLYNDIIGELREQKYMEERNNMSSQKKCGLYTIRVLIFILVLALLGGSGAAIYFVTAYTSD FLSSGKSQTEDNFVVLLVEFLPSLTITALNAVIPIIFGLVIKAEDYTPAFTIQYTLIRTVFLRLASLAVLVATLYQTISC TDKDTQCNVGQGSCDSYRCWETYVGQNFYKLAVLNALVHIAVTLAYELPRKLLTTKCSCGICQKIGPAEFDIPKNVLDLV YTQALCWIGFFYAPLLPILTVADLFFLFYLKYLSAMYNTTPPERPYKASKSNNFFMIVLMVTFFFCCVPVGYPMVSLEPS KGCGPFRIYTKMSVIVDATISNFPSTIRTILSLVTSASVIICLVVLLCLIIYYCAARSSAKSKAVNLMKEQLILEGKDKQ FLLNRIYELTGEKPGAKKVANGNVKTTASTIDETKKGYPDENGLKTLHVKEQVPDAVVYDIPDNEFNDSITTKDTAPLTK ETSFVDWGDGDTEENNNSRARSIATTGKVGIEDF |
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