Gene
| Gene Model ID | pfu_aug2.0_642.1_07755 |
|---|---|
| Locus | scaffold642.1 : 135756 ... 139747 : + |
| To GenomeBrowser | scaffold642.1:135756..139747 |
| Genes list of scaffold | scaffold642.1 |
| Synonym | pfu_aug1.0_7478.1_31393 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pituitary homeobox x-like isoform x1 | GO:0003677 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_642.1_07755.t1 | 2 | 1 | OAR | 57 | 60 | 3.5e-09 | 35.8 | 1.0 | 15000.0 | -4.9 |
| pfu_aug2.0_642.1_07755.t1 | 2 | 2 | OAR | 97 | 116 | 3.5e-09 | 35.8 | 2.4e-13 | 3.5e-09 | 35.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_642.1_07755.t1 | gi|676485084|ref|XP_009063549.1| | hypothetical protein LOTGIDRAFT_179482 [Lottia gigantea] | 6.0e-30 |
| pfu_aug2.0_642.1_07755.t1 | gi|524866905|ref|XP_005090268.1| | PREDICTED: pituitary homeobox x-like isoform X1 [Aplysia californica] | 2.0e-27 |
| pfu_aug2.0_642.1_07755.t1 | gi|260802145|ref|XP_002595953.1| | hypothetical protein BRAFLDRAFT_267830 [Branchiostoma floridae] | 4.0e-26 |
| pfu_aug2.0_642.1_07755.t1 | gi|261245041|ref|NP_001158396.1| | paired-like homeodomain 2 [Saccoglossus kowalevskii] | 8.0e-24 |
| pfu_aug2.0_642.1_07755.t1 | gi|242046476|ref|XP_002399444.1| | Pituitary homeobox, putative [Ixodes scapularis] | 5.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_642.1_07755.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_642.1_07755.t1 atgcagtctccattcgatgactctctgtacaacggctattcaaataattattgggccaccaaagtaccgagcccactggg cacaaagaccttcccatggggcttgaactctgtgaacccccatctatcgtcggtggtgtctacacaacccatgtgttttt cgtctccatccagcagtatcagtaattctatggttgggaacgttccaaatgttccaacgaacatgtcaaacacgggcacg ccctgtccgtacgcacccccggcaccgccctatatatacagccctaacagggatcagtgcacgagcagtattgcctcttt aagactaaaagccaaacatcattctacgacgtttggttatcccccggtaaaccccgccaacccaccctatccgcgtgcca atatgccgccgtgggcaacggcgcaacagtctgaaacattcttaaaactctctatctgtgctgactataatttaaatctc ccgcgtgaaaagtcacgtgatatttga |
|
Protein
| Protein ID | pfu_aug2.0_642.1_07755.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_642.1_07755.t1 MQSPFDDSLYNGYSNNYWATKVPSPLGTKTFPWGLNSVNPHLSSVVSTQPMCFSSPSSSISNSMVGNVPNVPTNMSNTGT PCPYAPPAPPYIYSPNRDQCTSSIASLRLKAKHHSTTFGYPPVNPANPPYPRANMPPWATAQQSETFLKLSICADYNLNL PREKSRDI |
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