Gene
| Gene Model ID | pfu_aug2.0_642.1_07756 |
|---|---|
| Locus | scaffold642.1 : 231897 ... 236441 : + |
| To GenomeBrowser | scaffold642.1:231897..236441 |
| Genes list of scaffold | scaffold642.1 |
| Synonym | pfu_aug1.0_5642.1_30995 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| synaptotagmin-17 isoform x4 | GO:0005215 GO:0006887 GO:0008021 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_642.1_07756.t1 | 2 | 1 | C2 | 178 | 270 | 5.29971e-42 | 141.5 | 5.2e-24 | 7.7e-20 | 70.5 |
| pfu_aug2.0_642.1_07756.t1 | 2 | 2 | C2 | 315 | 402 | 5.29971e-42 | 141.5 | 3.0e-24 | 4.5e-20 | 71.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_642.1_07756.t1 | gi|676480058|ref|XP_009061942.1| | synaptotagmin 17 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_642.1_07756.t1 | gi|291223503|ref|XP_002731749.1| | PREDICTED: synaptotagmin-17-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_642.1_07756.t1 | gi|698452063|ref|XP_009701114.1| | PREDICTED: synaptotagmin-17, partial [Cariama cristata] | 0.0 |
| pfu_aug2.0_642.1_07756.t1 | gi|699610663|ref|XP_009873485.1| | PREDICTED: synaptotagmin-17, partial [Apaloderma vittatum] | 0.0 |
| pfu_aug2.0_642.1_07756.t1 | gi|530640986|ref|XP_005307248.1| | PREDICTED: synaptotagmin-17 isoform X4 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_642.1_07756.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_642.1_07756.t1 atggcattgatagacacgtccaaaaaatgtctgaagaagatatgggaattcttctgctgtgatgatggatgttgcgagtg ttgtataaaaagaaagaagaaaattcaaaaatctgacattcagcattccttcagagaatcttcacagaggctcgactcta caagctccgcggctgagtcacacagtagcagccgaagtttccgagatcgaattgaatccgatatctcatcacgaactgac tccgtttcttccatgtctcaggtcagtggggattatagaaggggaacaaccacacccattattgacatgaaacccattga attctgggctgcaaataaagagaacgtgcagccaaaacaacacagacgacgtcttcctagtgagaccgagatcagcgtgg agaactttcagcgagatctgtacgaggaggctccgagctctgaaccttgtcttactgacgaggaaaaactagccaagtat cagctaggtcagattcacatagggctacaatacgatgtatcaaccagagttcttgtagtcaaagtcatcgaagccaaaga tttacccccaccatactgtctcgatgaaaacaaacaagatatggcgcattctaatccgtactgtaaagtttgcctgctgc cagaccagaaaaattcacaacagacatctgtccaacgaaaaacccagaatccgtcatggagtgaatacttcatgtttgag atgccttacagtgaagtacaaatgagaacactcgagattcttataaaggattttgacaagtattcacgtcactgtgtaat tggacaagtttatctgcctctcagcaacatcaatctcatcaagggcggccacatgtggaaagcactctcaccaagtacaa aggagagacaagacctcggggaaattctgctgtcattaaactaccttcccggagcaggaagattaaatattgacgtcatc aaagctaagcagcttctacaaacagacatgattggaggatctgacccctttgttaaagttacaatggtacattttgaaaa accgataaaaacgaagaagacatcttgcaagaaaaataccatagaccccgttttcaacgaatccataagctttaacgtca caccacaacaactagaaaataccagcatagtggtttccgtgtgggactacaacacaaaaagtaaagacgattttgtcggt cgcattgtcataggaaaatatgggacgggccctcacgagttcacacactggaaccggatgctcaattcacagagatctgc ggttgcgcagtggcattctctcagatcgaggcaggaatgtgaccaagtctctccggcatccattgcagttccgtga |
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Protein
| Protein ID | pfu_aug2.0_642.1_07756.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_642.1_07756.t1 MALIDTSKKCLKKIWEFFCCDDGCCECCIKRKKKIQKSDIQHSFRESSQRLDSTSSAAESHSSSRSFRDRIESDISSRTD SVSSMSQVSGDYRRGTTTPIIDMKPIEFWAANKENVQPKQHRRRLPSETEISVENFQRDLYEEAPSSEPCLTDEEKLAKY QLGQIHIGLQYDVSTRVLVVKVIEAKDLPPPYCLDENKQDMAHSNPYCKVCLLPDQKNSQQTSVQRKTQNPSWSEYFMFE MPYSEVQMRTLEILIKDFDKYSRHCVIGQVYLPLSNINLIKGGHMWKALSPSTKERQDLGEILLSLNYLPGAGRLNIDVI KAKQLLQTDMIGGSDPFVKVTMVHFEKPIKTKKTSCKKNTIDPVFNESISFNVTPQQLENTSIVVSVWDYNTKSKDDFVG RIVIGKYGTGPHEFTHWNRMLNSQRSAVAQWHSLRSRQECDQVSPASIAVP |
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