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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_643.1_11030
Locus scaffold643.1 : 153790 ... 172765 : -
To GenomeBrowser scaffold643.1:153790..172765
Genes list of scaffold scaffold643.1
Synonym pfu_aug1.0_2924.1_30288

Manual annotation
Annotation by Blast2GO
Annotation GO
immunoglobulin i-set domain protein GO:0009987 GO:0044699

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_643.1_11030.t1 11 1 ig 16 38 1.1e-33 115.1 1.4 3000.0 -1.6
pfu_aug2.0_643.1_11030.t1 11 1 I-set 21 57 0.0 437.2 6.3e-06 0.013 15.2
pfu_aug2.0_643.1_11030.t1 9 1 V-set 21 46 2.0e-31 108.2 0.097 210.0 1.8
pfu_aug2.0_643.1_11030.t1 11 2 ig 69 124 1.1e-33 115.1 0.075 160.0 2.5
pfu_aug2.0_643.1_11030.t1 9 1 Ig_2 97 139 0.0 205.0 0.0039 8.3 6.6
pfu_aug2.0_643.1_11030.t1 11 2 I-set 103 139 0.0 437.2 4.2e-07 0.0009 19.0
pfu_aug2.0_643.1_11030.t1 10 1 Ig_3 103 125 8.5e-38 128.6 0.64 1400.0 -0.1
pfu_aug2.0_643.1_11030.t1 9 2 V-set 104 129 2.0e-31 108.2 0.0094 20.0 5.1
pfu_aug2.0_643.1_11030.t1 11 3 I-set 149 241 0.0 437.2 9.2e-20 1.9e-16 59.6
pfu_aug2.0_643.1_11030.t1 10 2 Ig_3 157 227 8.5e-38 128.6 1.4e-06 0.003 18.0
pfu_aug2.0_643.1_11030.t1 9 2 Ig_2 158 241 0.0 205.0 7.7e-13 1.6e-09 37.7
pfu_aug2.0_643.1_11030.t1 9 3 V-set 159 241 2.0e-31 108.2 2.5e-06 0.0054 16.6
pfu_aug2.0_643.1_11030.t1 11 3 ig 163 226 1.1e-33 115.1 3.7e-08 7.8e-05 22.7
pfu_aug2.0_643.1_11030.t1 7 1 C2-set_2 163 193 7.2e-17 61.0 0.00033 0.69 9.8
pfu_aug2.0_643.1_11030.t1 11 4 I-set 329 419 0.0 437.2 1.4e-13 3.0e-10 39.8
pfu_aug2.0_643.1_11030.t1 9 3 Ig_2 339 413 0.0 205.0 3.1e-05 0.066 13.3
pfu_aug2.0_643.1_11030.t1 9 4 V-set 339 407 2.0e-31 108.2 0.0041 8.7 6.2
pfu_aug2.0_643.1_11030.t1 11 4 ig 342 400 1.1e-33 115.1 0.0025 5.2 7.2
pfu_aug2.0_643.1_11030.t1 10 3 Ig_3 379 406 8.5e-38 128.6 0.098 210.0 2.5
pfu_aug2.0_643.1_11030.t1 11 5 I-set 432 523 0.0 437.2 3.5e-23 7.5e-20 70.5
pfu_aug2.0_643.1_11030.t1 9 5 V-set 440 509 2.0e-31 108.2 4.2e-08 8.9e-05 22.3
pfu_aug2.0_643.1_11030.t1 9 4 Ig_2 443 523 0.0 205.0 1.6e-09 3.4e-06 27.0
pfu_aug2.0_643.1_11030.t1 11 5 ig 446 508 1.1e-33 115.1 8.3e-08 0.00018 21.5
pfu_aug2.0_643.1_11030.t1 10 4 Ig_3 449 509 8.5e-38 128.6 4.3e-08 9.0e-05 22.9
pfu_aug2.0_643.1_11030.t1 7 2 C2-set_2 454 514 7.2e-17 61.0 7.8e-05 0.17 11.8
pfu_aug2.0_643.1_11030.t1 9 6 V-set 593 663 2.0e-31 108.2 0.11 220.0 1.7
pfu_aug2.0_643.1_11030.t1 11 6 I-set 594 675 0.0 437.2 4.8e-12 1.0e-08 34.8
pfu_aug2.0_643.1_11030.t1 10 5 Ig_3 594 658 8.5e-38 128.6 0.00076 1.6 9.2
pfu_aug2.0_643.1_11030.t1 9 5 Ig_2 596 674 0.0 205.0 5.7e-05 0.12 12.5
pfu_aug2.0_643.1_11030.t1 7 3 C2-set_2 611 633 7.2e-17 61.0 0.015 33.0 4.4
pfu_aug2.0_643.1_11030.t1 11 6 ig 617 657 1.1e-33 115.1 0.3 640.0 0.5
pfu_aug2.0_643.1_11030.t1 11 7 I-set 705 730 0.0 437.2 2.0 4300.0 -2.4
pfu_aug2.0_643.1_11030.t1 10 6 Ig_3 714 730 8.5e-38 128.6 7.0 15000.0 -3.8
pfu_aug2.0_643.1_11030.t1 11 7 ig 714 732 1.1e-33 115.1 0.5 1100.0 -0.2
pfu_aug2.0_643.1_11030.t1 9 6 Ig_2 759 842 0.0 205.0 2.0e-11 4.2e-08 33.2
pfu_aug2.0_643.1_11030.t1 11 8 I-set 766 846 0.0 437.2 7.4e-16 1.6e-12 47.1
pfu_aug2.0_643.1_11030.t1 9 7 V-set 767 843 2.0e-31 108.2 6.5e-05 0.14 12.0
pfu_aug2.0_643.1_11030.t1 7 4 C2-set_2 769 797 7.2e-17 61.0 0.00014 0.3 11.0
pfu_aug2.0_643.1_11030.t1 10 7 Ig_3 770 831 8.5e-38 128.6 0.0011 2.3 8.7
pfu_aug2.0_643.1_11030.t1 11 8 ig 770 831 1.1e-33 115.1 2.2e-08 4.8e-05 23.4
pfu_aug2.0_643.1_11030.t1 11 9 I-set 868 958 0.0 437.2 4.3e-20 9.1e-17 60.6
pfu_aug2.0_643.1_11030.t1 10 8 Ig_3 880 945 8.5e-38 128.6 2.8e-07 0.00059 20.2
pfu_aug2.0_643.1_11030.t1 9 8 V-set 881 947 2.0e-31 108.2 0.00073 1.5 8.6
pfu_aug2.0_643.1_11030.t1 9 7 Ig_2 882 958 0.0 205.0 1.7e-11 3.6e-08 33.4
pfu_aug2.0_643.1_11030.t1 11 9 ig 886 943 1.1e-33 115.1 0.0034 7.2 6.8
pfu_aug2.0_643.1_11030.t1 7 5 C2-set_2 889 918 7.2e-17 61.0 0.018 37.0 4.2
pfu_aug2.0_643.1_11030.t1 11 10 I-set 974 1064 0.0 437.2 4.2e-21 8.9e-18 63.9
pfu_aug2.0_643.1_11030.t1 10 9 Ig_3 974 1051 8.5e-38 128.6 1.3e-09 2.7e-06 27.7
pfu_aug2.0_643.1_11030.t1 9 9 V-set 983 1053 2.0e-31 108.2 8.5e-08 0.00018 21.3
pfu_aug2.0_643.1_11030.t1 9 8 Ig_2 985 1055 0.0 205.0 1.6e-08 3.4e-05 23.8
pfu_aug2.0_643.1_11030.t1 11 10 ig 988 1045 1.1e-33 115.1 2.0e-05 0.043 13.9
pfu_aug2.0_643.1_11030.t1 7 6 C2-set_2 988 1018 7.2e-17 61.0 0.0024 5.0 7.0
pfu_aug2.0_643.1_11030.t1 10 10 Ig_3 1791 1839 8.5e-38 128.6 0.044 93.0 3.6
pfu_aug2.0_643.1_11030.t1 11 11 I-set 1793 1834 0.0 437.2 0.00013 0.28 11.0
pfu_aug2.0_643.1_11030.t1 9 9 Ig_2 1798 1836 0.0 205.0 0.049 100.0 3.1
pfu_aug2.0_643.1_11030.t1 11 11 ig 1821 1833 1.1e-33 115.1 2.4 5100.0 -2.4
pfu_aug2.0_643.1_11030.t1 7 7 C2-set_2 1821 1841 7.2e-17 61.0 0.33 700.0 0.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_643.1_11030.t1 gi|268561066|ref|XP_002646356.1| Hypothetical protein CBG12070 [Caenorhabditis briggsae] 0.0
pfu_aug2.0_643.1_11030.t1 gi|71980586|ref|NP_001020984.1| UNC-89, isoform a [Caenorhabditis elegans] 0.0
pfu_aug2.0_643.1_11030.t1 gi|71980604|ref|NP_001020990.1| UNC-89, isoform g [Caenorhabditis elegans] 0.0
pfu_aug2.0_643.1_11030.t1 gi|71980588|ref|NP_001020985.1| UNC-89, isoform b [Caenorhabditis elegans] 0.0
pfu_aug2.0_643.1_11030.t1 gi|71980598|ref|NP_001020988.1| UNC-89, isoform e [Caenorhabditis elegans] 0.0

Transcript
Transcript IDpfu_aug2.0_643.1_11030.t1
Definition-
>pfu_aug2.0_643.1_11030.t1
atggaatcgtcagagaaagccgatgttttgtcagggagttccgattcagaggaggagatccacgtgtaccacctacgtat
ccatgacaccgaaccaaaagatgccggagaatggaaaatagaggtcaaggacaaatacggcacggcctcaaccgcctgta
accttgctgtcgttgagccagaaaaagaacaagaaaagacagaagaccagaagatggattctgattcaacaacaaagaaa
tttacagagggagataactcgacaaaagtgaaaggagaaaagggcgacgcagatgacgaggaaatcctagtgtacaagct
gagaattcacgacgccgatctcaaagatgctggccaatggaagtgtgaagtgacagacaagtatggcgtcgcatctacct
cttgcaatctcatggttttcgattcctcccagccaagagaggcacctagatttaggacatctctatggaatgagactgcc
aaagagggggacagtttcaaactccgatgcctcgtcgccggaaacccccgacctcaaatcaaatggttcaaagatgacgt
tgatattacgaagagcagtcgccatgctattataactacacgtgacgatgggaccaccatcttggaaattgtgtcgcttc
ttgcgtcacgtgacactggcgtgtaccgatgcgaggctcacagtaatataggatacgctaccacagaagccaaacttact
gttaaaaaggatgatttcggttatatgagggaccaatattcaactctggaaaaaatcaacaaacgctctgattactatta
tgaggaaattgtagaggccgaagaaatttcgctgaacaagaaagttcggcctctcaagaagaagcatatcgatgcctatt
acgaaaactatcgaaatgaaagaaactccctgaaaactctctacgcctatgaaagggacgccattttgaaaatggggatc
aaatgggacaaagactacgccttctattttaaggagcacctaaaaaataaatgcgtagttgaaggagggacggtgatcat
gagctgttacgtggcaggaatacctccatttgtcaccagatggttcaaagacggcattgctctctgtagggacgaatacg
aaaagtacttcatacgtagtcgtagtgggtacctgagtttggagatcccgataacagatctggatgactccggagattac
gaggtggaggtacggaatgaacaaggcaggattagatcacattgctatctacaagtagaacctatttatgatcaaaagat
agagtaccaacagccaacatttttgctgaaagttcgccattgtcgtgttaaagttggacaaacggccacttttgaggcta
gtgttacgggatgtccaactccctctatacaatggtacaaagatggcgtcattatccaggaggatagtaggatcaccatg
catcacgtcagagaacaccattcttatactctcaatatccacgatgctgattttgatgacattggcctttataagtgtga
agcacacagctgggcaggaagggctagcacctctgctaagctcatcgttgttgagacaggagcagatctcatttcttgtg
aggaagatgaagaacagaacagaaagctgaccaaaatcgaaatcaaagacgtcaccaaaatcgacgaattccgaccaaaa
aagcaacctgttgaccaagtggccataatagaggacatgtacatggcaaatgacactgccgcaatcttcacacagcctcc
catattcacaacgctccttccccctaaaatgacagttgatcatggagaaagcctctttttgaaagttgagacggacggat
ttccaaaacctagagttgtttggatgagacaaatgcagaagattgaccccgatgcagaaggcataataataagtgaagat
ggattaaaaattaagaaagcaaaccacgatgaacattccggtacttacacggcaaaattgaataatggtctaaaggaagc
ggaatcgagttgtaaagttttggtcatggcatacactcatgaatccgacttgccaaaaggagatcagaagaagagtctga
aagattccgacatcataccaccaagtgattcgagtattcacaaagccgaggaatctgacacaccagaagacaaaactcta
caaatccctgcagttaccccaacagactcacaatgtctaagcagccatcttactaaggctgtaaaagaagagaaccttcc
aacctcaaaaactagtccccatttttctcaacctttagatgccgagtaccatcccctagaaagagatgaaaacgttcgaa
tgcagtgtattgtcgctggagatccgtccccaaaaatcatctggttcaaagatggcgagagactacaggaaagtagaaac
ctgaagattcaatgggaccccgtgacaggaatagccgcaatattgttgaagaaactacacattcttgatactggagacta
tgaatgttacgcctattctgagaacggatgttacaagaccaagacaaccctacacatcaaagctctggaacagcagcaga
taaagacagtgcctcatgagacgatcaaggagaaagtcttaccaaagttcatatctgatcttaaggataaaacttcctac
tccggaggtatcattcgtctggaatgtgccatagatggtcttcctgcaccggatgtaaaatggtgtaaggacggcgaaag
aattttcccgtcaaagggcaaattttcgatatcgaagctggatactcatcacaccctggttatagaaaactttgtgaagg
agaatcagggacagtattcatgtgaagcgacaaactcatccggaaccagtgtttctagtgcatatcttactgttaaagaa
gctgatgagactgacgctacatctgcagaaccatcctcgcccgtgtttgatgtgaaaatggataatgctatggtggtcca
agggggagtggcagttttcaaatgttctgcgcaaggacaacctttgcctcggttcaaatggcaaaaggacatgattgacg
tcacacaatcaaatagaataagtataaacaacagcccttctggggagagcacacttaccatcaataatgtttgcctagag
gacactggcatgtatgttgtcactgcaaaaaacagtcttggtagggagaaactatcggctaccctcatgatcaaagagcc
agaaaggaaatactcagtggattcaaagacagctcaagaggcagaggaaaagcctgcaaatacaaaagctgacctggcta
agtcagacgttgataaagttgaacaaccagagtccgtcgaaagagatcattcttcaaatgtactggaaactgaatcattt
tctcactttatgaaaaggaaacatcaaggcgatgaagtagccgatggtgtaagtttgactgagtcggaagtcaatgaaaa
agaagatgccctttcaccaagaaaagaagacaaaaaggaagaagattctaagtctagtgaaaaggatactgatagtaaat
cagatgtccttcaggcagagtcaccaacagagcaagcagttcaggaatcgaaagaaacgaaatcgtctcatacaacaaag
gaagatgtcaaagaagaagctgactctaccgaaaagaaaagagaccatagcacagatgtgttaaaggcagagtctttaga
gcatttcatggcaaggaaacatcaagatgacgacattgttgatgggatccatttagcagaacaagaggcactaaaatctg
aatccaaaacctcatcagagaaaaccaaggatggagatgaaaataaaaaagatatcaaaagggaaaagtcaagagaaaag
gacaaagatgacaagtcggaagaaaaggacaaagatgaaaaggtcaaagaacatagttcaaatgttcttgaagctgaatc
gctggaacattttatggctcgaaaacaccaaggagacgatatcgtggatggaattcatttagcggaacaagaagctcatg
acagtaaaattgagtcctccgaaggaaacaaggataacgaagcagataaaaaagaagggaatgaaaaagagagcacagat
gaaatatcaaagcgaaaggacaaagaccattgtacaaatgttctggaggcagaatctctggaacattttatgtctagaaa
acaccaaggagacgaacttgtcgatggaatacatctagcagaacaagaggccattgacagtgagaaaaagtcatctaatg
aaaacaagagtaatgaatctaataaaaaagaagtgaaagatgatgaaaacttaaagaaaatggatagagatacagcagac
aagtctgaagaaatgaaatcatcaatacctgctacagataaggaaactgagcaagactctaaagaatgtgttacaaagga
atcgtctgtttctgttcaaactgagggaagtttcgattttgagactgttccagaagtatcaagtcagcagtctgatgaat
cgaagactttaatggaagaaaaagacagtgccaaggaggaggataaaacggataaaaaaccaacaacgaaatcgcacgag
gatgagatagacttggaccaactggtatcaaaggcagaagaggttcttggagaacaatcgaagaagacagaagacatatc
gtttgaagatgttttggctagatctgtattggaagaatcggttacagaggcagctacagagatggacaagataaaatcaa
agcgaaaaaagttctcgaaaagtaaaaaacgatcagacagtgttgattcagagacggataaggacgttaaaagctctgtc
gtgaaagattctgatgaagcatcaaaggaaacatccggaacatccagtgattctaaggctgcagaggaggaacttgcaaa
agcagcatcagtatctaactctgaaacatcgccatctactgacataaagagtgactctactgacggaagtgccagtaaaa
aggcacagaagaaggcatctctaaagggagtgtctgatgttattattgaagaagtaaaaacagaagaagggcatatcgta
gaatctgctgctgcatctaagacatcaacagcagtagaatcgatgtcgtcatcaagcgcagatgtccaatctaaaatctc
tgaaaaacctttgcagagggttcaacaccaagtttcacaagaagaatttgcatctgcagttcacgacatcttagacgtaa
agagtataaagctgaatgaaacaagagaggccgtcattcaacagactacaacatgtgggaaaactcagattctggaggtt
agcgccagacgggtctctcgccagaatagtcagccaataggtgttgcctctgccacagatcaacatggtccaaaccatca
tgagcaccatccaccggagatcctacttccgccggatacccagtatgcatatgaacatacggaaatagaactcacggtaa
aggtcaaagccgcccgcggagcaaaggtcacatggtaccatgacggacaaaaagtcaatttcaaaggaaaagggatcaaa
gagagttcccattacgaactgtttgaggaagaatttcccatcgacaacccggatgcaaaataa

Protein
Protein IDpfu_aug2.0_643.1_11030.t1
Definition-
>pfu_aug2.0_643.1_11030.t1
MESSEKADVLSGSSDSEEEIHVYHLRIHDTEPKDAGEWKIEVKDKYGTASTACNLAVVEPEKEQEKTEDQKMDSDSTTKK
FTEGDNSTKVKGEKGDADDEEILVYKLRIHDADLKDAGQWKCEVTDKYGVASTSCNLMVFDSSQPREAPRFRTSLWNETA
KEGDSFKLRCLVAGNPRPQIKWFKDDVDITKSSRHAIITTRDDGTTILEIVSLLASRDTGVYRCEAHSNIGYATTEAKLT
VKKDDFGYMRDQYSTLEKINKRSDYYYEEIVEAEEISLNKKVRPLKKKHIDAYYENYRNERNSLKTLYAYERDAILKMGI
KWDKDYAFYFKEHLKNKCVVEGGTVIMSCYVAGIPPFVTRWFKDGIALCRDEYEKYFIRSRSGYLSLEIPITDLDDSGDY
EVEVRNEQGRIRSHCYLQVEPIYDQKIEYQQPTFLLKVRHCRVKVGQTATFEASVTGCPTPSIQWYKDGVIIQEDSRITM
HHVREHHSYTLNIHDADFDDIGLYKCEAHSWAGRASTSAKLIVVETGADLISCEEDEEQNRKLTKIEIKDVTKIDEFRPK
KQPVDQVAIIEDMYMANDTAAIFTQPPIFTTLLPPKMTVDHGESLFLKVETDGFPKPRVVWMRQMQKIDPDAEGIIISED
GLKIKKANHDEHSGTYTAKLNNGLKEAESSCKVLVMAYTHESDLPKGDQKKSLKDSDIIPPSDSSIHKAEESDTPEDKTL
QIPAVTPTDSQCLSSHLTKAVKEENLPTSKTSPHFSQPLDAEYHPLERDENVRMQCIVAGDPSPKIIWFKDGERLQESRN
LKIQWDPVTGIAAILLKKLHILDTGDYECYAYSENGCYKTKTTLHIKALEQQQIKTVPHETIKEKVLPKFISDLKDKTSY
SGGIIRLECAIDGLPAPDVKWCKDGERIFPSKGKFSISKLDTHHTLVIENFVKENQGQYSCEATNSSGTSVSSAYLTVKE
ADETDATSAEPSSPVFDVKMDNAMVVQGGVAVFKCSAQGQPLPRFKWQKDMIDVTQSNRISINNSPSGESTLTINNVCLE
DTGMYVVTAKNSLGREKLSATLMIKEPERKYSVDSKTAQEAEEKPANTKADLAKSDVDKVEQPESVERDHSSNVLETESF
SHFMKRKHQGDEVADGVSLTESEVNEKEDALSPRKEDKKEEDSKSSEKDTDSKSDVLQAESPTEQAVQESKETKSSHTTK
EDVKEEADSTEKKRDHSTDVLKAESLEHFMARKHQDDDIVDGIHLAEQEALKSESKTSSEKTKDGDENKKDIKREKSREK
DKDDKSEEKDKDEKVKEHSSNVLEAESLEHFMARKHQGDDIVDGIHLAEQEAHDSKIESSEGNKDNEADKKEGNEKESTD
EISKRKDKDHCTNVLEAESLEHFMSRKHQGDELVDGIHLAEQEAIDSEKKSSNENKSNESNKKEVKDDENLKKMDRDTAD
KSEEMKSSIPATDKETEQDSKECVTKESSVSVQTEGSFDFETVPEVSSQQSDESKTLMEEKDSAKEEDKTDKKPTTKSHE
DEIDLDQLVSKAEEVLGEQSKKTEDISFEDVLARSVLEESVTEAATEMDKIKSKRKKFSKSKKRSDSVDSETDKDVKSSV
VKDSDEASKETSGTSSDSKAAEEELAKAASVSNSETSPSTDIKSDSTDGSASKKAQKKASLKGVSDVIIEEVKTEEGHIV
ESAAASKTSTAVESMSSSSADVQSKISEKPLQRVQHQVSQEEFASAVHDILDVKSIKLNETREAVIQQTTTCGKTQILEV
SARRVSRQNSQPIGVASATDQHGPNHHEHHPPEILLPPDTQYAYEHTEIELTVKVKAARGAKVTWYHDGQKVNFKGKGIK
ESSHYELFEEEFPIDNPDAK

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