Gene
| Gene Model ID | pfu_aug2.0_643.1_11032 |
|---|---|
| Locus | scaffold643.1 : 217049 ... 218170 : - |
| To GenomeBrowser | scaffold643.1:217049..218170 |
| Genes list of scaffold | scaffold643.1 |
| Synonym | pfu_aug1.0_56168.1_27394 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_643.1_11032.t1 | 1 | 1 | 7tm_1 | 66 | 298 | 2.8e-13 | 49.6 | 1.3e-16 | 6.5e-13 | 48.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_643.1_11032.t1 | gi|551527916|ref|XP_005815429.1| | PREDICTED: trace amine-associated receptor 1-like [Xiphophorus maculatus] | 2.0e-07 |
| pfu_aug2.0_643.1_11032.t1 | gi|260832536|ref|XP_002611213.1| | hypothetical protein BRAFLDRAFT_207382 [Branchiostoma floridae] | 1.0e-06 |
| pfu_aug2.0_643.1_11032.t1 | gi|658913441|ref|XP_008396682.1| | PREDICTED: trace amine-associated receptor 1-like [Poecilia reticulata] | 4.0e-06 |
| pfu_aug2.0_643.1_11032.t1 | gi|688577526|ref|XP_009304366.1| | PREDICTED: neuromedin-U receptor 2-like [Danio rerio] | 5.0e-06 |
| pfu_aug2.0_643.1_11032.t1 | gi|557019466|ref|XP_006010086.1| | PREDICTED: growth hormone secretagogue receptor type 1-like [Latimeria chalumnae] | 8.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_643.1_11032.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_643.1_11032.t1 atggtcaattctagcgtattgataaaacaactcttcaacagcacagaggaattatacacattccataattctttcaaaga ctcactggcagactactgtgaaagtatctctttcatgcgcctcatggatgttagagaatctgatgtatattggggtcata ttgcagcactggttttgctttcaattggagtaattggtaacttaattaccattgggataataacatcgttacaaaagctt cacacgccgacgtttacaatgcttgccatgctcgccatagaagatttaactggtctgatttcgttttacattctagtttg gacagatataacattttggataacaaattgtcatccgaaagagacagcaagacaatggatgaagttcagcattgtctcaa agacagtagcaatgttgaattcggcattccatataacacttttatgctgtattcgctattacattgtagtacatcctcta cgaagtcagagtagactgtcaagtaggagagttattggatactccgtgatggcatggataatttgtataattgtcggctg tatacaactaccgtttttaggcgatggcttaaggctttcctttctgacttcaatcatcatactgggcaccacatctgcac tcattttgttcgtaccgacagttgttataatagttttgcattgcttaaaagtaagggctctacgtaattccccatcaact gtgcaaaatgttacaaggaaaatgtcttcaataatcagcgttatacttttagtgtatattctgacatcattgacttttcc tgttaattgctttgcagactttattgcatttgaagttatcaagcttttttctttgtcttacatgtttaattttgctatca atccattgatatattttttcaccggatttaatgtcataaatctcttcagttcttgcaaagtataa |
|
Protein
| Protein ID | pfu_aug2.0_643.1_11032.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_643.1_11032.t1 MVNSSVLIKQLFNSTEELYTFHNSFKDSLADYCESISFMRLMDVRESDVYWGHIAALVLLSIGVIGNLITIGIITSLQKL HTPTFTMLAMLAIEDLTGLISFYILVWTDITFWITNCHPKETARQWMKFSIVSKTVAMLNSAFHITLLCCIRYYIVVHPL RSQSRLSSRRVIGYSVMAWIICIIVGCIQLPFLGDGLRLSFLTSIIILGTTSALILFVPTVVIIVLHCLKVRALRNSPST VQNVTRKMSSIISVILLVYILTSLTFPVNCFADFIAFEVIKLFSLSYMFNFAINPLIYFFTGFNVINLFSSCKV |
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