Gene
| Gene Model ID | pfu_aug2.0_643.1_11033 |
|---|---|
| Locus | scaffold643.1 : 246989 ... 266071 : - |
| To GenomeBrowser | scaffold643.1:246989..266071 |
| Genes list of scaffold | scaffold643.1 |
| Synonym | pfu_aug1.0_35873.1_33973 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_643.1_11033.t1 | 1 | 1 | EGF | 146 | 175 | 4.6e-08 | 32.8 | 3.7e-11 | 1.1e-07 | 31.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_643.1_11033.t1 | gi|260799330|ref|XP_002594650.1| | hypothetical protein BRAFLDRAFT_107492 [Branchiostoma floridae] | 1.0e-07 |
| pfu_aug2.0_643.1_11033.t1 | gi|260799336|ref|XP_002594653.1| | hypothetical protein BRAFLDRAFT_151166 [Branchiostoma floridae] | 4.0e-07 |
| pfu_aug2.0_643.1_11033.t1 | gi|551488363|ref|XP_005795756.1| | PREDICTED: neurocan core protein-like [Xiphophorus maculatus] | 5.0e-07 |
| pfu_aug2.0_643.1_11033.t1 | gi|260799334|ref|XP_002594652.1| | hypothetical protein BRAFLDRAFT_251302 [Branchiostoma floridae] | 7.0e-07 |
| pfu_aug2.0_643.1_11033.t1 | gi|657735673|ref|XP_008313954.1| | PREDICTED: protein jagged-2 isoform X1 [Cynoglossus semilaevis] | 1.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_643.1_11033.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_643.1_11033.t1 gttttagacacggaaatttgagggagctatcacattttcttctgaggaagtataagagaatcaacggcaacctacacgaa gaactgggagagtttgatcttcccgatggattcgaatatggcagtgaacagtggatggagtatgaacacaacagtaccgg aaacggtcatgacatcattgagaacggcgacctaactcaaaaccccgatttgttcggacttttcggaagttttgagatat ggacaaaagatggtattcaaaagacctacatagatccgagcagtttgtctgtacagaatgcacagaatcatgaccatcac tatagaaacgacgcctacagaagacaagttagaaaaaggaacttcaatagagaagtaactctctgggaaaatggaattat tccatacgaaattgacacaaacactataatccaaccatgtgacagttcaccatgtcagaacgggggaacatgtacaaaca gtggtaacacctttacatgtgcatgtactacagggtggtcaggagctacttgtacagtctccgtatcaagcacatcaata tgtaacttcgaaaattctacgccttgtttcctgaacaacggctacacacgtacgcaggtaaatgcaggtaccatgccacc agcgccatcttcaggcggctcgtactgtatagtacaagatacaaccaactatgaggtgatactgagcatcaatcagacag ctgccgggcttaccataggtcagcagtactgtctaggttataactataccatcggcggcaccaattataataatgagatc ggggtagcttcagacgtaaccctaaataatgccttgcaatatacggatgagcagacggcctggacacgagcctcgtacag ctttactgcaagcgcaaataatccggtgctgtatattttgacatacgaggatctgaccaatggggaatatggcgctgtag atgacgtcacattgtcttccggttcctgttaa |
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Protein
| Protein ID | pfu_aug2.0_643.1_11033.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_643.1_11033.t1 FRHGNLRELSHFLLRKYKRINGNLHEELGEFDLPDGFEYGSEQWMEYEHNSTGNGHDIIENGDLTQNPDLFGLFGSFEIW TKDGIQKTYIDPSSLSVQNAQNHDHHYRNDAYRRQVRKRNFNREVTLWENGIIPYEIDTNTIIQPCDSSPCQNGGTCTNS GNTFTCACTTGWSGATCTVSVSSTSICNFENSTPCFLNNGYTRTQVNAGTMPPAPSSGGSYCIVQDTTNYEVILSINQTA AGLTIGQQYCLGYNYTIGGTNYNNEIGVASDVTLNNALQYTDEQTAWTRASYSFTASANNPVLYILTYEDLTNGEYGAVD DVTLSSGSC |
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