Gene
| Gene Model ID | pfu_aug2.0_645.1_17678 |
|---|---|
| Locus | scaffold645.1 : 86128 ... 112735 : - |
| To GenomeBrowser | scaffold645.1:86128..112735 |
| Genes list of scaffold | scaffold645.1 |
| Synonym | pfu_aug1.0_31359.1_26567 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_645.1_17678.t1 | 3 | 1 | SH2 | 9 | 86 | 8.6e-34 | 115.1 | 2.2e-20 | 6.5e-17 | 61.1 |
| pfu_aug2.0_645.1_17678.t1 | 3 | 2 | SH2 | 161 | 235 | 8.6e-34 | 115.1 | 3.0e-17 | 8.9e-14 | 51.0 |
| pfu_aug2.0_645.1_17678.t1 | 3 | 3 | SH2 | 360 | 379 | 8.6e-34 | 115.1 | 1.3 | 3700.0 | -2.2 |
| pfu_aug2.0_645.1_17678.t1 | 1 | 1 | Pkinase_Tyr | 453 | 703 | 0.0 | 287.9 | 0.0 | 0.0 | 287.3 |
| pfu_aug2.0_645.1_17678.t1 | 1 | 1 | Pkinase | 453 | 694 | 1.99965e-42 | 145.1 | 1.4013e-45 | 3.39955e-42 | 144.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_645.1_17678.t1 | gi|573877471|ref|XP_006626983.1| | PREDICTED: tyrosine-protein kinase SYK-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_645.1_17678.t1 | gi|698441931|ref|XP_009817253.1| | PREDICTED: LOW QUALITY PROTEIN: tyrosine-protein kinase ZAP-70 [Gavia stellata] | 0.0 |
| pfu_aug2.0_645.1_17678.t1 | gi|704498425|ref|XP_010077275.1| | PREDICTED: tyrosine-protein kinase ZAP-70 isoform X4 [Pterocles gutturalis] | 0.0 |
| pfu_aug2.0_645.1_17678.t1 | gi|663283140|ref|XP_008499167.1| | PREDICTED: LOW QUALITY PROTEIN: tyrosine-protein kinase ZAP-70 [Calypte anna] | 0.0 |
| pfu_aug2.0_645.1_17678.t1 | gi|698466706|ref|XP_009704996.1| | PREDICTED: tyrosine-protein kinase ZAP-70 isoform X3 [Cariama cristata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_645.1_17678.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_645.1_17678.t1 atgagaaagccatctgccgagccatatttttatggacgtataacccgcgaggaagccgaacttttcctgaatgaacgagg atcagatgaagggctgtatctactgagggagagtataaatccactcggcaactatgccgtcagcatctgtcataataaaa atgttcatcattacgccattgagaagaaatatgacgggaaatttatgatcgcagagggcaaggcatttgccggtcctgta gaattgatagaacaccacaaaattcaccttgatgggtttgtaacgaagcctgttaaaccatgtaatcggctaccattcca gccgcctattgcattcaggggaatgacatacacagatctcgaaaatgagctcttgacaaaagctgaatcaatgaagaaag tgaagatggagacggccctgggagctcagagagagcacctcattgtacttgtggccaaagatctacatctgaaaatgccg tggtttcactcacggatatctcgtgacgaggccgataaaagaatcggtaacgacggtcatcaagacggaaaattcttagt acgaatgagggacgataaaaagacgtttgcgttaacgatcagttggaagggagatacacgtcattacatgatagagaaga gagataagttccatatcctgggtggaccaaagtttgattgtgtcatgatgatgattgaccactatcacaacaaatcagac ggtttgttatgtaagctgaccgtaccgtgcccggcaccaaactacgacaaaaaactgctcaaaaaatacatggagaacag ccatgataatacggcatactccagtcatgaattccaacgtgagaggtctcaggaactaagtgccacgtctttatcacttc cccctcagcctacaactccggtctcaagacacggttctcgagcctcgatgaatcgtccccttcccaacattccctctcct acgtcaccagtggacgacataccaagttcaccggcacccaaacctccgggctctcagcacccggtacttccagacagata tggtggaaactgggatgacgagccagagaagagagatgagttccatatcctgggtggaccaaagattgattgtgtcatga tgatgattgaccactatcacaacaaatcagacggtttgttatgtaaactgaccgtaccgtgcccggcaccaaactacgac aaaaaactgctcaaaaatccccctgccctaccgtcacgtaacaatatggcgaggatgatgaacggtatcgataatatggc attggagaaaatctacgataccgtaccaagaacggaggaaacattccaacttcaaagagaccaaattctcctagatgaag aaaaattaggatcgggacagtttggttcagtgaagaaaggggaatgtcgattacggagcggcaaaaaaattcctgttgca gttaaaacacttaaaaatgaagatgtaacagcaaaggatgatatgatgaaggaagccaagtttatgatgaacttgtctca caagcacattgttcgtatgattggtatatgtgatgctgagtgtataatgttggtgttagagttatgtccaaaaggacccc tcaactcatacttaaagcagaataagtctttgaaacagtcgacaatcgtagaactgatgtggcaggtgtcccagggtatg tcgtacctaggaaagaagaattacgtacatcgtgatttagccgctagaaatgtgttattggtgcatgaacatttagctaa aattagtgatttcggaatgtccaaggccgtaggcagggaccataattattacgaggccaaggaagcgggtaaatggcccc tgaagtggtacgcccctgaatgtgtctactattggaagtttgatagcaagtcagacgtgtggagttacggtgtcacacta tgggaagctacatcatatggagagaaaccttataggaaaatgaaaggacaggagattttacggttccttgtagaagaaaa tcaacgtttgcctaaacctgctcattgccatgacattgtgtacaatatcatgatggaatgctggacttatgatcgttgta aacaaagtgctaaatttagtaatatcatgtttcacctcagacaacaagcttcaaacctcagtaaaacatga |
|
Protein
| Protein ID | pfu_aug2.0_645.1_17678.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_645.1_17678.t1 MRKPSAEPYFYGRITREEAELFLNERGSDEGLYLLRESINPLGNYAVSICHNKNVHHYAIEKKYDGKFMIAEGKAFAGPV ELIEHHKIHLDGFVTKPVKPCNRLPFQPPIAFRGMTYTDLENELLTKAESMKKVKMETALGAQREHLIVLVAKDLHLKMP WFHSRISRDEADKRIGNDGHQDGKFLVRMRDDKKTFALTISWKGDTRHYMIEKRDKFHILGGPKFDCVMMMIDHYHNKSD GLLCKLTVPCPAPNYDKKLLKKYMENSHDNTAYSSHEFQRERSQELSATSLSLPPQPTTPVSRHGSRASMNRPLPNIPSP TSPVDDIPSSPAPKPPGSQHPVLPDRYGGNWDDEPEKRDEFHILGGPKIDCVMMMIDHYHNKSDGLLCKLTVPCPAPNYD KKLLKNPPALPSRNNMARMMNGIDNMALEKIYDTVPRTEETFQLQRDQILLDEEKLGSGQFGSVKKGECRLRSGKKIPVA VKTLKNEDVTAKDDMMKEAKFMMNLSHKHIVRMIGICDAECIMLVLELCPKGPLNSYLKQNKSLKQSTIVELMWQVSQGM SYLGKKNYVHRDLAARNVLLVHEHLAKISDFGMSKAVGRDHNYYEAKEAGKWPLKWYAPECVYYWKFDSKSDVWSYGVTL WEATSYGEKPYRKMKGQEILRFLVEENQRLPKPAHCHDIVYNIMMECWTYDRCKQSAKFSNIMFHLRQQASNLSKT |
|