Gene
| Gene Model ID | pfu_aug2.0_646.1_21013 |
|---|---|
| Locus | scaffold646.1 : 50276 ... 59524 : + |
| To GenomeBrowser | scaffold646.1:50276..59524 |
| Genes list of scaffold | scaffold646.1 |
| Synonym | pfu_aug1.0_102538.1_06302 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_646.1_21013.t1 | 2 | 1 | TGFb_propeptide | 2 | 118 | 7.5e-06 | 25.4 | 1.0e-09 | 7.5e-06 | 25.4 |
| pfu_aug2.0_646.1_21013.t1 | 2 | 1 | TGF_beta | 282 | 325 | 5.0e-14 | 52.4 | 9.0e-18 | 6.7e-14 | 52.0 |
| pfu_aug2.0_646.1_21013.t1 | 2 | 2 | TGFb_propeptide | 374 | 413 | 7.5e-06 | 25.4 | 0.76 | 5700.0 | -3.7 |
| pfu_aug2.0_646.1_21013.t1 | 2 | 2 | TGF_beta | 413 | 423 | 5.0e-14 | 52.4 | 0.42 | 3100.0 | -1.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_646.1_21013.t1 | gi|632958641|ref|XP_007895156.1| | PREDICTED: bone morphogenetic protein 3 [Callorhinchus milii] | 6.0e-19 |
| pfu_aug2.0_646.1_21013.t1 | gi|678011864|ref|XP_009081378.1| | PREDICTED: bone morphogenetic protein 3, partial [Acanthisitta chloris] | 1.0e-18 |
| pfu_aug2.0_646.1_21013.t1 | gi|617384221|ref|XP_007547445.1| | PREDICTED: bone morphogenetic protein 3 [Poecilia formosa] | 3.0e-18 |
| pfu_aug2.0_646.1_21013.t1 | gi|556989906|ref|XP_005999823.1| | PREDICTED: bone morphogenetic protein 3 [Latimeria chalumnae] | 4.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_646.1_21013.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_646.1_21013.t1 atgtttgtattcaacttgtcatcagtggacaccagtgaaaaactactcagcgcagaaatccatcttttcaaaaggaaaag caagaaaaactcaaaaaggagagacatagatttatttctctatgagatagcacctcattatatggtggaagacggaaaaa tcacgatgagggccgaaagtttcggctggcagtggtatgacgtcaccaactcagtagtgagttgtctggcggcaaggcgg aaaagacctcacttgtttgcgctggattttaaggcggagaaaacaaacggaaaatataaatctatcgcattaaagaagtt cgtacgtcatcattccatgccatttttagttatttattcgaacgatactcaggaaaatcgctttgaccaattagattctt tagccgaaaaaatgttaagcgaaaattaccaacattctcaaagtgaaagtgaaagtggagagaaagaaattagctcaaat ttgaaaaccaaagagcaaagacatgtaaatggggattcggaaaaagttgttatccgagaaaaacgatccatttttgacaa tgagataccggaaaccccgatggactatgggcttttcgaaaggagatacaatattccgcaaactcatccgggtattttac aaggcaggcgtcaaaagaagcccgtcattgcaaatcatcaacttataccgtatcccaaaaaatcgaatcgatcaagaaaa aggaaaaatcgaaacaaaaacagacgacggaaaaatcataggaagaacagacgaaagttaaagttccctaaagaatggga agattatcatcgcaatctagccaacgaagaaaacgccggaagtgtgtgtgggcgccggaagttggttgtgaacttcgcag acataggctggggtgattggattatttccccgaagtcgtttgatgctcattattgcacgggaacctgtcctttcccactt actaaggagcgttacgaaaagaggtatccagtatactgtatacactaccctgtattgaccacggcggaacacatacacat aggagtcaacaaaatcaaacacaacaacttcaacaaacaacagaggacaacgaaacacaacaacatccacacagaacggt acaacaaacagcagaggacaacgaaacacacaacaacactcaaacagaacggtccaacaaacaacagaggacaacaaaac acaacagtatccacacagaacggtacaacaaacaacagaggacaacgaaacacacagcaacatccatgcagaacggtaca actaacagtcgaagtagtcgcccttaaacacgaatga |
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Protein
| Protein ID | pfu_aug2.0_646.1_21013.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_646.1_21013.t1 MFVFNLSSVDTSEKLLSAEIHLFKRKSKKNSKRRDIDLFLYEIAPHYMVEDGKITMRAESFGWQWYDVTNSVVSCLAARR KRPHLFALDFKAEKTNGKYKSIALKKFVRHHSMPFLVIYSNDTQENRFDQLDSLAEKMLSENYQHSQSESESGEKEISSN LKTKEQRHVNGDSEKVVIREKRSIFDNEIPETPMDYGLFERRYNIPQTHPGILQGRRQKKPVIANHQLIPYPKKSNRSRK RKNRNKNRRRKNHRKNRRKLKFPKEWEDYHRNLANEENAGSVCGRRKLVVNFADIGWGDWIISPKSFDAHYCTGTCPFPL TKERYEKRYPVYCIHYPVLTTAEHIHIGVNKIKHNNFNKQQRTTKHNNIHTERYNKQQRTTKHTTTLKQNGPTNNRGQQN TTVSTQNGTTNNRGQRNTQQHPCRTVQLTVEVVALKHE |
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